Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq6 104 7e-19 seq178 102 3e-18 seq110 98.7 3e-17 seq92 98.7 3e-17 seq47 98.7 3e-17 seq8 98.7 3e-17 seq19 87.8 6e-14 seq40 84.2 7e-13 seq68 78.8 3e-11 >seq6 Length=8210397 Score = 104 bits (114), Expect = 7e-19 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2761 TGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820 ||| | |||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 8105144 TGTGTGTGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTG 8105085 Query 2821 GTTCAACCCCGGGCTTCAGC 2840 |||| | |||||| ||| || Sbjct 8105084 GTTCGATCCCGGGTTTCGGC 8105065 >seq178 Length=1290396 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1147427 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 1147368 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 1147367 GATCCCGGGTTTCGGC 1147352 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1098981 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1098922 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1098921 CCGGGTTTCGGC 1098910 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1154380 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1154321 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1154320 CCGGGTTTCGGC 1154309 >seq110 Length=2246181 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 389890 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 389831 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 389830 CCGGGTTTCGGC 389819 >seq92 Length=2546385 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 993484 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 993543 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 993544 CCGGGTTTCGGC 993555 >seq47 Length=3725210 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1412359 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1412418 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1412419 CCGGGTTTCGGC 1412430 >seq8 Length=7322812 Score = 98.7 bits (108), Expect = 3e-17 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || |||| ||| |||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 4360152 TTGTGGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTT 4360211 Query 2824 CAACCCCGGGCTTCAGC 2840 ||| |||||| ||| || Sbjct 4360212 CAATCCCGGGTTTCGGC 4360228 Score = 91.5 bits (100), Expect = 5e-15 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| | ||||||||| ||| ||||||||||||||| Sbjct 4358199 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGCTCTGAAGGTCCCTGGTTCA 4358258 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 4358259 ATCCCGGGTTTCGGC 4358273 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| | ||||||||| ||| |||||||||||||||| | Sbjct 4358662 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGCTCTGAAGGTCCCTGGTTCAATC 4358721 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4358722 CCGGGTTTCGGC 4358733 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| | Sbjct 6257331 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 6257272 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 6257271 CCTGGTTTCGGC 6257260 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||| |||||||| | ||||||||||||| |||||||||||||||| | Sbjct 4361182 GCCGAAATAGCTCAGTAGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 4361123 Query 2829 CCGGGCTTCAGC 2840 | ||| ||| || Sbjct 4361122 CTGGGTTTCGGC 4361111 Score = 84.2 bits (92), Expect = 7e-13 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| | ||||||||||||| |||| |||||||||| Sbjct 6258200 ATTGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGCCCCTGGTTCA 6258141 Query 2826 ACCCCGGGCTT 2836 | | |||| || Sbjct 6258140 ATCTCGGGTTT 6258130 >seq19 Length=5465001 Score = 87.8 bits (96), Expect = 6e-14 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || |||||||||||||||||||||| ||| || | ||||||||||||||||||||||| | Sbjct 3038057 GCCGAAGTAGCTCAGTTGGGAGAGCGTTACACCGTAGATCTAAAGGTCCCTGGTTCAATC 3037998 Query 2829 CCGGGCTT 2836 | ||| || Sbjct 3037997 CTGGGGTT 3037990 >seq40 Length=4256315 Score = 84.2 bits (92), Expect = 7e-13 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 2770 CTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCC 2829 ||||| || ||||| |||||| || | ||||||||||||| |||||||||||||||| || Sbjct 348878 CTGAAATAACTCAGCTGGGAGCGCTTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCC 348937 Query 2830 CGGGCTTCAGC 2840 ||| |||||| Sbjct 348938 TGGGTTTCAGC 348948 >seq68 Length=3266240 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| | | ||||||||||| |||||||||||||||| Sbjct 3006454 GCCGAAATAGCTCAGTTGGGAGAGCGTCACACTGAAGATCTGAAGGTCCCTGGTTCAA 3006397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848345603220