Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq87 118 1e-21 >seq87 Length=2632686 Score = 118 bits (130), Expect = 1e-21 Identities = 125/162 (77%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC-GCGAA 34623 || || ||| ||||||||| ||||| |||||| | |||||||| |||||||| |||| Sbjct 460817 GACCTTCCTAGGATGGCGCTGCCCCCCTGCCACGCACTCTGCCAGTTCTACGTGTGCGAC 460876 Query 34624 TGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTT 34683 || |||||||| || ||||| || || || || | || ||||| ||||||||||| || Sbjct 460877 -GGCGAGCTGTCGTGTCAGCTGTACCAGCGCTCTGCTGATATGGGATTAGGGGTGCCTTT 460935 Query 34684 CAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 |||||| || || || | || || || |||||||| || || Sbjct 460936 CAACATCGCCAGCTATTCACTTCTTACCTACATGATTGCACA 460977 Score = 118 bits (130), Expect = 1e-21 Identities = 125/162 (77%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || |||||||| || || || | || || || |||||||| ||||||||||| ||| Sbjct 460977 TGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGCACCCCTAATCCC 460918 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC-GACGTAGAATTG 6738 || || | || || || || ||||| || |||||||| || |||| |||||||| || Sbjct 460917 ATATCAGCAGAGCGCTGGTACAGCTGACACGACAGCTCGCC-GTCGCACACGTAGAACTG 460859 Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 |||||| | |||||| ||||| ||||||||| ||| || || Sbjct 460858 GCAGAGTGCGTGGCAGGGGGGCAGCGCCATCCTAGGAAGGTC 460817 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || |||||||||||||| || |||||||||| |||| |||||||| | |||||| | Sbjct 460042 GGAGTGAAGATCTGGGATGCCAACGGGTCTCGGAACTTCCTGGACAACCTTGGGTTCACT 460101 Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 | || ||||| ||| | || || || || || ||||||||||| |||||||| || Sbjct 460102 GACAGAGAAGAGGGTGACCTAGGACCTGTGTATGGTTTCCAGTGGAGGCACTTTGGTGCA 460161 Query 34442 GAGTA 34446 ||||| Sbjct 460162 GAGTA 460166 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||| || || || || || | ||| ||||| || Sbjct 460166 TACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTCACCCTCTTCT 460107 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | |||||| | |||||||| |||| |||||||||| || |||||||||||| Sbjct 460106 CTGTCAGTGAACCCAAGGTTGTCCAGGAAGTTCCGAGACCCGTTGGCATCCCAGATCTTC 460047 Query 7019 ACCCC 7023 || || Sbjct 460046 ACTCC 460042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448221854665920