Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq87 122 7e-23 seq167 100 2e-16 >seq87 Length=2632686 Score = 122 bits (134), Expect = 7e-23 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 29725 GTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCC 29784 ||| || |||||||| || || || || |||||||||||||| || |||||||| | || Sbjct 460978 GTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGCACCCCTAATCC 460919 Query 29785 CATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTG 29844 ||| || | || | |||||| ||||| ||||| ||||| ||||||| |||||| ||||| Sbjct 460918 CATATCAGCAGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCACACGTAGAACTG 460859 Query 29845 ACACATGGCATGGCACGGAGGAAGGGCCAT 29874 || | || ||||| || || || ||||| Sbjct 460858 GCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 460829 Score = 114 bits (126), Expect = 1e-20 Identities = 118/153 (77%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||||||||||||| || ||||| ||||| ||||| |||||||| |||| ||| Sbjct 460154 AAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTCACCCTCTTCTCTGTCAGTGAAC 460095 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || ||||||| |||| | || |||||||| ||||||||||| || || || || Sbjct 460094 CCAAGGTTGTCCAGGAAGTTCCGAGACCCGTTGGCATCCCAGATCTTCACTCCTTTTTCT 460035 Query 30137 GAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30168 || ||||| ||||| ||||| || |||| |||| Sbjct 460034 GACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 460002 >seq167 Length=1420731 Score = 100 bits (110), Expect = 2e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 || |||||||||||| | ||| | |||| ||||||||||| ||||| || |||||||| Sbjct 1227006 CTTCCTGCTGAGGACAATGTTGACTCTGTTGCTCAGAGGTCTGTTCTTCTCTGGGATGGA 1227065 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 | |||| ||||| | ||||| |||||||| |||||||| ||| Sbjct 1227066 GTACCACGTCTTCTTGCCCATGATCACCACATTCTGCTTGCCT 1227108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406127380975096