Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq50 150 3e-31 seq127 113 6e-20 seq2 109 8e-19 >seq50 Length=3533640 Score = 150 bits (166), Expect = 3e-31 Identities = 128/158 (81%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 ||||| | |||||| || | ||||||||| ||| |||||| ||| | ||| || | Sbjct 1494029 CCGATTAGGATGAGCCGTGCGGTCTGGAAGAGTCTTTCGTCATCCCAGTATGGGTGGACC 1493970 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 | |||||| ||||||||||| | ||||||||| | ||||||||| |||||||||||||| Sbjct 1493969 TCTTTCAGCACATCGCACACACGGTTGTGTTCGCGGAGCCAGATGGTGGCGTACATCATC 1493910 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGC 9392 || ||||| ||||||||||| ||||| || |||||||| Sbjct 1493909 AGACCAGGGACCAGGCCAAATGCCTCGTGGCCGACAGC 1493872 Score = 150 bits (166), Expect = 3e-31 Identities = 139/176 (79%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || |||||||||||||||||||||||| |||||||||||||| || | || ||||| Sbjct 1495701 CCTCCGAAGGTGCTGGGCTTCCAGTACTCCGGGGAGCAGATGGGATTTCCGATTAGGCCC 1495642 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 ||||||||||| |||||||||| ||| | || | || || |||||| |||| | | | Sbjct 1495641 TTGAGGGAGAAAGGAGCCCCCATCTCCACCATTGTTTCCCCAAAGATGCCGTTATGTCTG 1495582 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAG 8550 ||||| ||||||| | || | ||| ||||||||||| ||||||| ||||| || Sbjct 1495581 GGCTTCTCCACCAGCAGGCCCGGGTAGAGCTCCACAGCATCGACGTGCCCGTACAG 1495526 Score = 86.0 bits (94), Expect = 9e-12 Identities = 201/298 (67%), Gaps = 14/298 (5%) Strand=Plus/Minus Query 8946 TACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGA---GT 9002 ||| || ||||| || || || |||||||| || || || | | | |||||||| || Sbjct 1494664 TACCCGTCCGGCAATCTGATTGGTGAACGACTCCACCAGGTTGCTGATGCCGTGCTCGGT 1494605 Query 9003 CATGAGTATGGAATTGTTGTAGACGAAGTTAACGTAGTCATACTTTGTTTTATCAATCTC 9062 || || || ||||| |||| || | |||| || | ||| | ||||| | Sbjct 1494604 CACGACAGAGG---TGTTGAAGACAAACTGCTTGTAGCTGTAATCTGTCTCCTCAATGTG 1494548 Query 9063 AAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9122 || ||| ||||| |||| |||||||| || | |||| ||||| || || || Sbjct 1494547 GAAACTATCGGGCATCAGAGGGTGCCAGTGGTAAAGGGTGTTGAACTCAGATGCGATGCG 1494488 Query 9123 ATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAAT 9181 || ||||||||||| || | ||||||||| ||||| | |||| || | || | Sbjct 1494487 GTTCTGGTACTGGAAGCGCTG-GTTAAAGAGCAGCTCGGGGTCAAACTTGAGTTTGAAGT 1494429 Query 9182 GGTAGCCGCTGAGCTGCTGAACGTATTGC---GTCACGATAATGTTGATGGTTTCCCC 9236 | |||||||| || ||||| ||||| | | ||||| || |||||||| || || Sbjct 1494428 GATAGCCGCTCAGATGCTGCACGTAGTCCTCAATCACG---ATTTTGATGGTCTCACC 1494374 >seq127 Length=1908066 Score = 113 bits (124), Expect = 6e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || ||||||||||||| | |||||||| || ||||| ||| ||| |||||| Sbjct 1797256 TCACCAATAATGATGAGTCTGGCTGTCTGGAAAAGCTGCTCATCATCCCAGGTGGGATGT 1797315 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 ||| || || | || || || ||||| ||||||| ||||| || ||||| ||||| Sbjct 1797316 TCTGCCTTTAGGATGTCACAGACTCTGTTATGTTCCCGCAGCCATATGGTGGCATACATG 1797375 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 | || || || | | |||||| |||| ||||||| ||||||||| ||| | | || Sbjct 1797376 GTTAGACCCGGCAGGATGCCAAATACCTCCTGACCGATGGCCAGACGCTTGTCTGCTGGG 1797435 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTC 9446 | | |||||| | ||||||||| |||| || Sbjct 1797436 ATGTTTTCAGGATACACCATGTGCACTGGGACCTC 1797470 Score = 100 bits (110), Expect = 4e-16 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 ||||||| ||| |||| ||| || || | | ||| || |||||||||| Sbjct 1792489 GGACACCATTTGCTGTTGAGACACACCAGTTTTTTCAGAGTGGCTGTCTTGACGATATTA 1792548 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || || ||||| || |||||||||||||||||||| | || |||||||| ||| Sbjct 1792549 AAGCCGGTTTCTCCTCCAAAGGTGCTGGGCTTCCAGTATTCAGGCGAGCAGATTGGGTTT 1792608 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 | | |||||||| || || || ||||| |||| ||| | |||||||| || || ||| Sbjct 1792609 CCAAGCAGGCCTTTCAGTGAAAAGGGAGCACCCATCTCCACCATGCTCTCTCCAAAAATG 1792668 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 || || |||||| || || | || | || | ||| | ||||| || || | ||| Sbjct 1792669 GCTTTAGGACGGATTTTCTCAAGCATTATGCCTGGGTAAAACTCCAGGGCGTCTATGTCA 1792728 Query 8543 CCGTAAAG 8550 || || || Sbjct 1792729 CCATAGAG 1792736 >seq2 Length=10686569 Score = 109 bits (120), Expect = 8e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||||| | ||| || |||||||||||||||||||| |||| ||||| || ||| Sbjct 6168561 AAGCCCACCTTTCCTCCAAAGGTGCTGGGCTTCCAGTATTCCGGAGAGCATATAGGGTTT 6168620 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 ||| ||||||||| |||||||| || || |||| ||| | ||||| ||||| || ||| Sbjct 6168621 CCCAGGAGGCCTTTAAGGGAGAAGGGGGCACCCATCTCCACCATGCTTTCACCAAATATG 6168680 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 || | || | || |||| ||| || |||| ||| | |||| || || | ||| Sbjct 6168681 GCCCCCGCTCGTGTTTTCTCCAACAACAAGCCGGGGTAAAATTCCAGTGCGTCAATGTCA 6168740 Query 8543 CCGTAAAG 8550 |||| || Sbjct 6168741 TCGTAGAG 6168748 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || |||||||| ||||| || ||||||||||| || ||||| || ||| ||||| Sbjct 6170922 TCACCGATAATAATGAGCCGTGTGGTCTGGAAAAGCTGCTCATCGTCCCAGGTGGGATGC 6170981 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || ||||| | ||| || || | |||||| ||||| ||||| | ||||||||||| Sbjct 6170982 TCCGCTTTCAATATATCACAGACTCGGTTGTGCTCCCTCAGCCACAGCGTGGCGTACATT 6171041 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 | ||||| | || ||| | | || ||||||| ||||| | | |||| Sbjct 6171042 CCCAAACCAGGGAGAAGTCCATAGACTTCCTGACCGATAGCCATCTGAGCCTCAGCGGGG 6171101 Query 9412 ACTTCGGGAGGATAGATCAT 9431 ||| ||||||| ||| |||| Sbjct 6171102 ACTCCGGGAGGGTAGCTCAT 6171121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716811958493440