Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq249 109 5e-19 seq80 86.0 6e-12 >seq249 Length=855460 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 41679 GAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGC 41738 || |||| ||||| ||||||||| | | || || ||||||||||| || || ||||| | Sbjct 398381 GAGTGTTGTAGTCAGAGAGGGTGTGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCC 398322 Query 41739 GCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG 41798 ||| ||||| | ||| | || ||||| ||| |||||| |||||| | | | Sbjct 398321 TCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATTTTGGCCTTCAAGTTCTCAATGG 398262 Query 41799 TGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCT 41858 |||| || | ||| ||||||| || || || ||||| || || ||||| || || |||| Sbjct 398261 TGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATCT 398202 Query 41859 GCATG 41863 ||||| Sbjct 398201 GCATG 398197 >seq80 Length=2822622 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | ||||| || |||||| ||| | Sbjct 742253 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGG 742312 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||| | | | ||||| || | ||| ||||| | || || || ||| Sbjct 742313 ATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTA 742372 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTTATC 41868 || || || || || || || ||||||||||| || Sbjct 742373 CCAGTTAGGGTTTTCACAAAGATCTGCATGTTTTC 742407 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || || || || ||| ||||||||| ||||| ||||| ||||||||||| Sbjct 765071 AGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 765130 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 | || || ||||||||||| || || ||||| | ||| ||||| Sbjct 765131 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTC 765174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462262184603200