Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq30 104 4e-17 >seq30 Length=4849498 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || || ||| | ||| | || | | | Sbjct 2502465 ATGCAGATCTTTGTGAAGACGCTGACTGGTAAGACCATCACTCTGGAGGTGGAGCCCAGT 2502406 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || |||||||||||||| || || |||||||| ||| Sbjct 2502405 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAAGAGGGCATTCCACCTGACCAA 2502346 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || || ||||| |||||| |||| || | || || || Sbjct 2502345 CAGCGTCTGATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACCCTCTCTGACTACAAC 2502286 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||| ||| | ||| | || | ||| | |||| ||||| Sbjct 2502285 ATCCAGAAAGAATCCACTCTCCATCTTGTCCTGCGTCTCAGAGGAGGTAT 2502236 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || || || | ||| | || | | | Sbjct 2502237 ATGCAGATCTTTGTGAAGACGCTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 2502178 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || |||||||||||||| ||||| |||||||| || Sbjct 2502177 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAAGAGGGTATTCCACCTGACCAG 2502118 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| ||||| || | |||||| | || || | || || || Sbjct 2502117 CAGCGTCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGCACCCTTTCTGACTACAAC 2502058 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| ||| | ||| | || | ||| | |||| ||||| Sbjct 2502057 ATTCAGAAAGAATCCACTCTCCATCTTGTCCTGCGTCTCAGAGGAGGTAT 2502008 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || || || | ||| | || | | | Sbjct 2502009 ATGCAGATCTTTGTGAAGACGCTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 2501950 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || |||||||||||||| || || |||||||| || Sbjct 2501949 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAAGAGGGCATTCCACCTGACCAG 2501890 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| ||||| || | |||||| | || || | || || || Sbjct 2501889 CAGCGTCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGCACCCTCTCTGACTACAAC 2501830 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| ||| | ||| | || | ||| | |||| ||||| Sbjct 2501829 ATTCAGAAAGAATCCACTCTCCATCTTGTCCTGCGTCTCAGAGGAGGTAT 2501780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752778682822400