Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq58 93.3 6e-14 >seq58 Length=3746050 Score = 93.3 bits (102), Expect = 6e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | ||||| | | ||||| ||||||||||||||| ||||| ||||| ||| Sbjct 1798027 CTGTGGTATGCCATTATTGAGTCTCAGACAGAGACTGGAACTCCTTACATGCTCTATAAG 1798086 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| | ||| | || |||||||| | | ||||||| ||||| | ||| ||| Sbjct 1798087 GATGCTTGCAATAGGAAAAGCAACCAGCAGAATCTGGGCACTATCAAATCCAGCAACCTG 1798146 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 ||||| ||||| ||||||||| || Sbjct 1798147 TGCACAGAAATCGTAGAGTACACC 1798170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738432904721680