Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq652 116 3e-21 >seq652 Length=327282 Score = 116 bits (128), Expect = 3e-21 Identities = 129/171 (75%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| | ||||| || || || | ||||||||||| ||||| || || ||||| || Sbjct 262372 CATGTCTTTATACTCAGCACCAAAGTGTCTCCACTGGAAACCGTATACAGGGCCTAGATC 262313 Query 25833 TCCATCTTCCCTGTGCTCA---AAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGC 25889 ||| || || | ||||| || || |||||||||| ||||| | || || || || Sbjct 262312 TCCCTCCTCAC---GCTCAGTAAATCCACTCTTATCCAGGAAGTCCCGTGAGCCGTTCGC 262256 Query 25890 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||||||||||| || || ||||| || |||||||||| |||||| || || Sbjct 262255 ATCCCAGATCTTCACACCTTTCTCTGAAAGCTCTTTGGCGTTTGTTGAACC 262205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338962296827814