Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq472 159 5e-34 seq99 150 3e-31 >seq472 Length=505873 Score = 159 bits (176), Expect = 5e-34 Identities = 187/253 (74%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || ||||| | ||||| || | |||||| || || | |||||| ||| || ||||| Sbjct 212494 TCACCGATGAGAATGAGCCGCGAGGTCTGGAAGAGCCGCTCGTCATCCCAGTCCGGATGC 212553 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 || |||| || || ||||| || | ||||||||||| |||||||| || || |||||| Sbjct 212554 TCCTGTTTGAGTACGTCGCAGACGCGGTTGTGTTCCCGAAGCCAGATTGTCGCATACATC 212613 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 ||||| || || ||||| ||||| ||||| ||||| ||||| | || || ||| Sbjct 212614 ATGAGGCCGGGGACCAGACCAAAGGCCTCATGACCTACAGCAAAGCGATGGGACTCTGGC 212673 Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849 || | |||||||||| ||||| ||||||||| || |||| | ||| || |||| ||| Sbjct 212674 ACATGGGGAGGATAGTGCATGTCCACCTGGACGTCACTGACTGTGGGAGGGTACACCTCA 212733 Query 9850 CCGTCAATAATCT 9862 || || | || || Sbjct 212734 CCATCCAGAACCT 212746 Score = 140 bits (154), Expect = 5e-28 Identities = 218/311 (70%), Gaps = 3/311 (1%) Strand=Plus/Plus Query 8669 TTGGGAACTCGGAACGCGGCCAACGGACA---CCCTTTGACGTTGCTACAGACTAGAGAC 8725 ||||| || ||| | |||| ||||| ||| |||||||| | ||||| || | Sbjct 210046 TTGGGTACGTTGAAGGACGCCACAGGACAAGGCCCCTTGACGTTATTGCAGACCAGCCTC 210105 Query 8726 TGGATAGTTGCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTC 8785 || | || || | |||||||| | || || || | ||||| ||||||||||| ||| Sbjct 210106 TGCAGAGAGGCGGTGTTGACGATGTCGAAGCCAACTTTCCCGCCAAAGGTGCTGGGCTTC 210165 Query 8786 CAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCC 8845 ||||| | |||||||||||| ||| |||| || ||||| || || | ||||| ||| Sbjct 210166 CAGTACTCAGGGGAGCAGATGGGGTTTCCCATAAGACCTTTCAGCGAGTATGGAGCACCC 210225 Query 8846 AGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCG 8905 | || | ||| | || || ||||||||||| | |||||||| || || | | ||| Sbjct 210226 ATTTCCACCATGGTTTCTCCAAAGATGGCGTTCGTCCGGGGCTTCTCAACGAGCAGGCCG 210285 Query 8906 GTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCC 8965 ||||| | ||||| || || | |||||||| | || || || || || || ||| Sbjct 210286 GTGTAGAGTTCCACGGCGTCAACATCTCCGTACATCTCCTCCAGCTCTGCCGCCATCTCC 210345 Query 8966 TTTTCTCCTGT 8976 || || ||||| Sbjct 210346 TTCTCACCTGT 210356 >seq99 Length=2640589 Score = 150 bits (166), Expect = 3e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 8735 GCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCC 8794 || || |||||||| |||| ||||| | || || || |||||||| ||||||| | Sbjct 730909 GCGCTGTTGACGATGTCAAATCCCACTTTCCCACCAAAAGTGCTGGGCATCCAGTACTCA 730968 Query 8795 GGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGA 8854 |||||||||||| |||| |||| |||||||| |||||||| || || |||| ||| | Sbjct 730969 GGGGAGCAGATGGGGTTCCCCATCAGGCCTTTCAGGGAAAAGGGGGCGCCCATCTCCACC 731028 Query 8855 ATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAAC 8914 ||| |||| || || | ||||||||| | |||||| ||||||| | || | ||| | | Sbjct 731029 ATGGTCTCTCCAAACACGGCGTTGGGCCTGGGCTTCTCCACCAGCAGCCCAGAGTAGAGC 731088 Query 8915 TCCACAGCCTCGATGTCTCCGTAAAG 8940 ||||| | || ||||||||||| || Sbjct 731089 TCCACGGATTCTATGTCTCCGTACAG 731114 Score = 145 bits (160), Expect = 1e-29 Identities = 185/255 (73%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || ||||| | ||||| || |||||||| || | | ||||| ||| ||||| || Sbjct 733359 TCACCGATCAGAATGAGCCGCGTGGTCTGGAAGATGCGCTCGTCGTCCCAGTCTGGGTGC 733418 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 || || |||| || || || || | |||||| ||||| ||||||| || ||||||||| Sbjct 733419 TCCCGCTTCATCACGTCACAGACACGGTTGTGCTCCCTCAGCCAGAGCGTGGCGTACATC 733478 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 ||||| ||||| |||||||| || || || ||||| ||||| | || | || || Sbjct 733479 ATGAGGCCAGGAACCAGGCCGAACGCTTCGTGACCCACAGCAAAGCGGTGTTCCTCCGGG 733538 Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849 | | ||||| || ||||| |||||| |||||||| ||| |||||| |||| || Sbjct 733539 GCATGAGGAGGGTAATGCATGTCCACCTGAACATCTTTCACCAGGGGGGGGTACACCTCG 733598 Query 9850 CCGTCAATAATCTGA 9864 ||||| | || |||| Sbjct 733599 CCGTCCACAACCTGA 733613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 706013805821920