Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2913 82.4 6e-11 >seq2913 Length=17693 Score = 82.4 bits (90), Expect = 6e-11 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAA-GATCTAAGGAA 114389 |||||||| ||||| |||||||||| ||||||| |||||| || | | |||| |||||| Sbjct 11286 CATGTATTAGCTCTGGAATTACCACAGTTATCCGAGTAACGTGTGGAGCGATCAAAGGAA 11345 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 11346 CCATAACTGATTTAATGAGCCATTCG 11371 Score = 82.4 bits (90), Expect = 6e-11 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAA-GATCTAAGGAA 115586 |||||||| ||||| |||||||||| ||||||| |||||| || | | |||| |||||| Sbjct 11286 CATGTATTAGCTCTGGAATTACCACAGTTATCCGAGTAACGTGTGGAGCGATCAAAGGAA 11345 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 11346 CCATAACTGATTTAATGAGCCATTCG 11371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395690400261436