Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq30 91.5 1e-13 >seq30 Length=4849498 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || ||||| || |||||||| || ||| | | | || || ||||| Sbjct 2502262 ATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCCAATTG 2502321 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 |||||||| | |||| |||||||||||| |||||| || || || || ||| || Sbjct 2502322 CTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGTGGAATGCCCTCTTTATCTTGAATCTT 2502381 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || || || || || || || | || ||||| ||||| || Sbjct 2502382 GGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTACCAGT 2502441 Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180 ||| || || ||||| || ||||| ||| Sbjct 2502442 CAGCGTCTTCACAAAGATCTGCATCTTT 2502469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356157076394630