Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq5227 118 3e-22 >seq5227 Length=1301 Score = 118 bits (130), Expect = 3e-22 Identities = 213/309 (69%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 28909 AGCGGCACCAGGTGCGCAGCACGCATCTTCATCTTGCTGGCAGGGATGGTCCACACGGCC 28968 || ||||| |||||| | |||||||||||||| |||||||||| ||| |||| Sbjct 292 AGGGGCACTCGGTGCGGACGTCGCATCTTCATCTTTGCGGCAGGGATGCGCCATTCGGCA 351 Query 28969 GCGTCGAGGTCGAACTCCTCCCATTCCGCATGCCGCAGTTCGCCAGGACGCAGGAACACC 29028 || || | | |||||| ||||||| || | || || || || || || | ||||| | Sbjct 352 GCTTCCATATTGAACTCGGCCCATTCGGCCTTTCGGAGCTCTCCTGGCCGGACGAACATC 411 Query 29029 AGCGGCGCCAGCCGCAGCGCCGCGCGTGTGATGGCAGATCCGCTGTATGCCTCGATGGAG 29088 ||||||||||||||||| || | |||| || ||| | | | ||||| | | Sbjct 412 AGCGGCGCCAGCCGCAGGGCGTATCTCGTGACCGCCTGTCCCTCGAAACCGTCGATCGCG 471 Query 29089 CGCAGCAGGCCACCCAGCTGCACGGGG-TCAGTAATCGCCGCATGGTGGGCCTCCTTAGG 29147 || || ||| | || | |||| |||| || |||| || | |||| | | || || Sbjct 472 CGAAGTAGGGCGCCGA-CTGCGTGGGGCTCGACGATCGTGGCGCGATGGGTCACTTTCGG 530 Query 29148 CGGCGCGAGCGCTCCTTTCAGGTCGGCAACCGGGTTTCGCTCGGCGCGGCCAGTGGCCAC 29207 || | |||| ||||| || ||||| ||||| ||||| |||||||| ||||| | Sbjct 531 CGTCACGAGAGCTCCGCGGAGATCGGCCGTCGGGTCGCGCTCAGCGCGGCCGGTGGCGAT 590 Query 29208 GGCGTAGCG 29216 ||| |||| Sbjct 591 GGCAAAGCG 599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128363169992684