Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq83 98.7 2e-15 seq58 96.9 5e-15 >seq83 Length=3002203 Score = 98.7 bits (108), Expect = 2e-15 Identities = 91/114 (80%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 200178 AAATTTTGTTTACAGACTGGTTCCGGAGTACATGGACCCTGCAGGATGACCCTTGTAAAA 200237 |||| |||||| |||| ||||| ||| |||||||| ||||||||||| |||||||| Sbjct 1736592 AAATGTTGTTT-CAGAGTGGTTTAGGACCACATGGACTCTGCAGGATGATCCTTGTAAGC 1736534 Query 200238 AATATCACGAAGTGCTCATTATCAACCCCGTTCTATTAGTCCCTCCAACCAAGG 200291 ||||| |||| || |||||| | || ||| || | |||| |||||||| |||| Sbjct 1736533 AATATTACGAGGTCCTCATTGTTAATCCCATTTTGCTAGTGCCTCCAACGAAGG 1736480 >seq58 Length=3746050 Score = 96.9 bits (106), Expect = 5e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | ||||||| || || |||| ||||| ||||| || | Sbjct 1800558 CCTGCTTCCAGCCATAAAAGTGCATGCTAGTGAGCTTGCCGTAATTGGGCTCGGCAATAT 1800499 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | || || || |||||||||||||| ||||||| | | | ||| || ||||| || || | Sbjct 1800498 GGATATTGAGGGACTGGCTTTGGTCAATGAAAGCCCCTCTATCAGCAGCCATCTTAATGA 1800439 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 |||||| |||||||||||||| ||||| Sbjct 1800438 CCACCTTCTGAGAAATCTCCCACACAGTCTT 1800408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792337189850080