Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq450 125 3e-23 seq416 118 4e-21 seq721 84.2 9e-11 >seq450 Length=544606 Score = 125 bits (138), Expect = 3e-23 Identities = 451/698 (65%), Gaps = 7/698 (1%) Strand=Plus/Plus Query 450910 AGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGG 450969 |||| | |||||||| || || ||||| || | || ||||| ||||| | ||| |||| Sbjct 311396 AGTATCCATTGGAATCGACCTGGGAACTACTTACTCCTGTGTGGGTGTGTTCCAGCATGG 311455 Query 450970 AAATGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTAAGTT 451028 ||||| ||||| || || ||||| || || | || |||| ||||| | || | Sbjct 311456 CAATGTTGAAATCATTGCCAATGATCAGGGCAACA-GAACAACTCCAAGCTATGTCGCCT 311514 Query 451029 TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCA 451088 |||| || | || || || | || | ||||| ||| ||| || ||| Sbjct 311515 TTACAGACACTGAGAGGCTCATTGGAGATGCTGCCAAAAACCAGGTTGCCATGAACCCCA 311574 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 | |||||| | | |||||| |||||| | ||||| || | || |||||| | || | Sbjct 311575 ACAACACAATTTTTGATGCCAAACGTCTGATTGGTCGAAAGTTTGATGACCCTGTAGTTC 311634 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 || || | || ||| | | | | || | ||| | | || || | | | Sbjct 311635 AATCTGACATGAAGCTCTGGCCCTTTAAAGTGATCAATGACGGCAGCAAACCAAAAGTCC 311694 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 ||||| | || || || || || || || || || || || || || || ||||| | Sbjct 311695 AAGTAGAATACAAGGGGGAGACGAAGACATTCTACCCAGAGGAGATCTCCTCCATGGTCC 311754 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCC-AGTTACTGATGCAGTA 451327 | |||||||| || | || || ||| |||| ||| | | || |||| || Sbjct 311755 TGGTCAAAATGAAGGAGATTGCTGAGGCCTAT-TTGGGTCTGAGAATCACCAATGCTGTC 311813 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || || ||||| |||||||||||||| |||| |||| || || || ||||| ||| Sbjct 311814 ATCACAGTTCCAGCTTATTTCAATGACTCACAGAGGCAGGCTACCAAGGATGCTGGAGTA 311873 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 |||||||| || ||||| | | || || ||||| || || || || || | || ||| Sbjct 311874 ATTGCTGGCTTGAATGTGTTGAGGATCATCAATGAGCCAACTGCTGCCGCCATTGCCTAT 311933 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || | ||| || ||||| || || | ||| | | | ||||| | || ||| Sbjct 311934 GG-GTTGGACAAGAGCAAGAA--AGGGGAGAGGAATGTCCTGATCTTTGACCTGGGAGGA 311990 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || ||| |||| || | | | ||||| ||||| | ||||| || || ||||| Sbjct 311991 GGCACTTTTGATGTGTCCATCTTGACCATTGAGGATGGTATCTTTGAGGTGAAAGCAACA 312050 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || ||||| || || || || || |||| || Sbjct 312051 GCTGGCGACACTCACCTGGGTGGGGAGGACTTTGACAA 312088 >seq416 Length=617323 Score = 118 bits (130), Expect = 4e-21 Identities = 460/714 (64%), Gaps = 17/714 (2%) Strand=Plus/Minus Query 450899 TCTGTCAAAAAAGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTT 450958 |||| ||| ||| || ||||| ||||| || || || |||| || |||||||| || Sbjct 6360 TCTGCTAAAGGAGTTGCTATTGGCATTGACCTGGGCACTACCTACTCTTGTGTAGGAGTG 6301 Query 450959 TACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCA 451018 | || ||||||| || || || || || |||||||| ||| | || || || || Sbjct 6300 TTTCAGCATGGAAAAGTGGAGATCATTGCTAATGACCAGGGAAACAGGACCACCCC--CA 6243 Query 451019 TGGGTAAGT----TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAAT--CAATG 451072 | || || || || || |||| || || | || | ||||| ||| ||| Sbjct 6242 --GCTATGTGGCCTTCACAGACACAGAGAGGCTCATTGGAGATGCTGCCAAAAACCAA-- 6187 Query 451073 GTAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTAT 451132 ||| | || |||| ||||| || | || || || | | || ||||| | || | Sbjct 6186 GTAGCTATGAACCCCAACAACACCGTGTTCGACGCCAAGAGGCTGATCGGCCGCAAGTTT 6127 Query 451133 GATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAA 451192 || ||| || |||||| || | || || | | | || | | | | Sbjct 6126 GACGATCCTATCGTACAATCTGACATGAAGCACTGGCCCTTCCAAGTCACCAGTGATGGA 6067 Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAA-CTTTTGCTCCTGAAGA 451251 |||||||| | ||||||| | || ||||| || || || | ||| | | |||||||| Sbjct 6066 GGAAAGCCAAAGGTTCAAGTTGAGTACAAAGGAGAGACGAAGAGCTTCTAC-CCTGAAGA 6008 Query 451252 AATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCC 451311 || || || |||||||| || ||||| || | ||||| ||| |||| Sbjct 6007 GATCTCCTCCATGGTTCTGGTGAAGATGAAGGAGATTGCAGAGGCCTATCTTGGACAGAA 5948 Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 || || |||| || |||||||| || || || |||||||| | || |||| || || Sbjct 5947 GGTAACAAATGCTGTTATTACTGTACCTGCCTACTTCAATGACTCCCAGAGGCAGGCCAC 5888 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 |||||||| ||| ||||||||| | || || || | || || ||||| || ||||| Sbjct 5887 CAAAGATGCTGGAGTGATTGCTGGTCTGAACGTCCTGAGGATCATCAATGAGCCCACAGC 5828 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491 || || | || ||||| || ||| || |||||| | ||| || | | | Sbjct 5827 TGCAGCGATCGCCTATGGCCT-GGACAAAGGCAAGAAA--GGAGAGCGCAACGTGCTGAT 5771 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 ||||| | || || ||||| ||| || | || | ||||||||||| | || Sbjct 5770 CTTTGACCTGGGAGGTGGAACCTTCGATGTGTCCATCCTGACCATTGAAGATGGCATCTT 5711 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || || || || ||||| || || || ||||| |||| || Sbjct 5710 TGAGGTGAAAGCCACAGCAGGAGACACTCACCTGGGTGGAGAAGACTTTGACAA 5657 >seq721 Length=292229 Score = 84.2 bits (92), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || |||||||| ||||| || || ||||| || | ||||| || || | || |||||| Sbjct 65756 CAGGCAACTAAGGATGCTGGTCAGATTGCAGGCCTTAATGTACTCAGAGTCATCAATGAA 65815 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||||||||||||||||| || |||||||| Sbjct 65816 CCTACAGCAGCTGCTCTGGCGTATGGACT 65844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1968541455967944