Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq450 336 2e-86 seq416 206 2e-47 seq179 116 3e-20 seq19 104 2e-16 >seq450 Length=544606 Score = 336 bits (372), Expect = 2e-86 Identities = 963/1466 (66%), Gaps = 26/1466 (2%) Strand=Plus/Minus Query 517257 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 517316 |||||| ||| || || ||||| |||||||| | ||| || || ||||| || || || | Sbjct 312855 CGGCAGACACGTTCAGGATACCGTTGGCATCAATATCGAAAGTCACTTCGATCTGGGGTA 312796 Query 517317 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 517376 | || | | || || ||||| ||| | | || |||| || ||| || |||| Sbjct 312795 CACCACGTGGTGCTGGGGGGATACCTGTGAGCTCGAACCTTCCAAGCAGATTGTTGTCTT 312736 Query 517377 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 517436 |||| | || ||||| || | | ||||| || | | || || ||||| | Sbjct 312735 TAGTCATGGCTCTCTCACCTTCATAGACCTGGATCAGCACACCTGGCTGGTTGTCTGAGT 312676 Query 517437 AAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 517495 | || | ||| | |||| | | ||| || || || ||||| | | || | Sbjct 312675 AGGTGGAAAAGA-TCTGTGTCTGTTTGGTGGGGATGGTGGTGTTGCGTTTGATGAGGGCA 312617 Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||||| | || || || || | || || || || |||| ||||| | || | Sbjct 312616 GTCATAACTCTTCCAGCGGTCTCGATGCCCAGTGATAGCGGAGCAACATCCAGCAGCAGC 312557 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | | || | |||||| ||| | ||| | || || || || || | || ||||| Sbjct 312556 AAGTCCTGGACGTTTTCAGAAGTGTCACCCATGAGGATGGCAGCCTGCACGGCTGCACCG 312497 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 || || || |||||||| ||||||| | | || || | | |||||||| || | Sbjct 312496 TAAGCGACTGCTTCATCTGGATTAATGCTCTTGTTGAGGTCCCTGCCATTGAAGAACTCC 312437 Query 517676 GAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 ||||| | ||| | | | || || | | ||||| ||||| || ||||| ||||| Sbjct 312436 TGCAGAAGCT-TCTGGATCCTGGGGATTCTTGTGGATCCGCCAACCAAGACAATATCATG 312378 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 | ||| || ||||||| ||| | ||| | | | ||||| || |||||||| | Sbjct 312377 AATCTGGGACTTATCCATTTTGGCATCTCTAAGAGCCTTTTCTACTGGTTCAAGGGTGCC 312318 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTGACATTATA 517851 |||||| | || || || || || || ||||||||| | |||| | | Sbjct 312317 TCTAAAGAGCTCAGAGTTTAGCTCCTCAAAGCGAGCTCTAGTTATGGAAGTG---TAGAA 312261 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 |||||| || || |||| || |||| |||||| | | ||||| |||||| || | Sbjct 312260 ATCAATGCCATCAAACAGGGAGTCAATTTCAATGCTGGCCTGAGTGCTAGAAGACAGGGT 312201 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC----TTTTGCTGATTGAT 517967 || || || | ||||| ||||| | | || | | || || | ||| |||| Sbjct 312200 CCGCTTTGCTCTCTCACAGGCTGTGCGCAACCTCCTGACTGCCCTCTTGTTCTGGCTGAT 312141 Query 517968 TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATT 518025 ||| |||| | |||||||| || || || ||| | |||| || | || || Sbjct 312140 G----TCTTTTTTGTGCTTTCTCTTAAACTCCTCCACAAAG--TGTTGGACCATGCGGTT 312087 Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||||| || || || |||| | ||| | || | || ||| | || | || | || Sbjct 312086 GTCAAAGTCCTCCCCACCCAGGTGAGTGTCGCCAGCTGTTGCTTTCACCTCAAAGATACC 312027 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 ||| |||| | ||| | | |||||| || || || |||| ||||| || || || Sbjct 312026 ATCCTCAATGGTCAAGATGGACACATCAAAAGTGCCTCCTCCCAGGTCAAAGATCAGGAC 311967 Query 518146 ATTCATTTCTT-TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 |||| | || | ||||| | || ||| ||||| |||| || ||||||||||| | Sbjct 311966 ATTCCTCTCCCCTTTCTTGCTCTTGTCCAAC-CCATAGGCAATGGCGGCAGCAGTTGGCT 311908 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||| || || ||||| ||||| | ||||||||| ||| ||||| || || || || | Sbjct 311907 CATTGATGATCCTCAACACATTCAAGCCAGCAATTACTCCAGCATCCTTGGTAGCCTGCC 311848 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTT-ACCA 518323 | ||||| || || ||||| || ||||| || || || |||| || | |||| ||| Sbjct 311847 TCTGTGAGTCATTGAAATAAGCTGGAACTGTGATGACAGCATTGGTGA-TTCTCAGACCC 311789 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 | ||| || || | | |||||||| | | ||| || || || | |||||| Sbjct 311788 AAATAGGCCTCAGCAATCTCCTTCATTTTGACCAGGACCATGGAGGAGATCTCCTCTGGG 311729 Query 518384 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | || ||| | || | ||| ||||| | | |||||| | || |||| Sbjct 311728 TAGAATGTCTTCGTCTCCCCCTTGTATTCTACTTGGACTTTTGGTTTGCTGCCGTCATTG 311669 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 || |||||||| |||||| ||||| || |||||||| |||||| ||| | || | Sbjct 311668 ATCACTTTAAAGGGCCAGAGCTTCATGTCAGATTGAACTACAGGGTCATCAAACTTTCGA 311609 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | ||||| ||||||||||| || ||| | || || || ||| | || | |||| Sbjct 311608 CCAATCAGACGTTTGGCATCAAAAATTGTGTTGTTGGGGTTCATGGCAACCTGGTTTTTG 311549 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||||||||| || || || |||||||| | ||||| ||||||||| | Sbjct 311548 GCAGCATCTCCAATGAGCCTCTCAGTGTCTGTAAAGGCGACATAGCTTGGAGTTGTTCTG 311489 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || || |||||||| ||||| |||||||| || |||| || | ||||| ||||| Sbjct 311488 TTGCCCTGATCATTGGCAATGATTTCAACATTGCCATGCTGGAACACACCCACACAGGAG 311429 Query 518684 AAAGTTGTTCCTAAATCAATACCAAT 518709 |||| ||||| | || || ||||| Sbjct 311428 TAAGTAGTTCCCAGGTCGATTCCAAT 311403 >seq416 Length=617323 Score = 206 bits (228), Expect = 2e-47 Identities = 488/732 (67%), Gaps = 4/732 (1%) Strand=Plus/Plus Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 || |||||||| || || ||| | | || || || || ||||| ||||| || ||| Sbjct 5618 TTCCTCTTGAATTCCTCCACAAAGTGGTTCACCAGGCGGTTGTCAAAGTCTTCTCCACCC 5677 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 | | ||| | ||||| || ||| | || | || | |||||||||| | || | Sbjct 5678 AGGTGAGTGTCTCCTGCTGTGGCTTTCACCTCAAAGATGCCATCTTCAATGGTCAGGATG 5737 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT-TGTCTTG 518163 | ||||| ||||||||| |||| ||||| || || || || ||| | ||||| Sbjct 5738 GACACATCGAAGGTTCCACCTCCCAGGTCAAAGATCAGCACGTTGCGCTCTCCTTTCTTG 5797 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 ||| || || ||||| || | || ||||| || || ||||| || || |||| || Sbjct 5798 CCTTTG-TCCAGGCCATAGGCGATCGCTGCAGCTGTGGGCTCATTGATGATCCTCAGGAC 5856 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 || ||||||||||| ||| |||||||| ||||| || || || || || || || || Sbjct 5857 GTTCAGACCAGCAATCACTCCAGCATCTTTGGTGGCCTGCCTCTGGGAGTCATTGAAGTA 5916 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTT 518342 ||||| ||||||||||| |||| |||| ||||| | |||| ||| || ||| | | Sbjct 5917 GGCAGGTACAGTAATAACAGCATTTGTTACCTTCTGT-CCAAGATAGGCCTCTGCAATCT 5975 Query 518343 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCAT 518402 ||||| || | || ||| || || || | ||| ||| | | ||| | || Sbjct 5976 CCTTCATCTTCACCAGAACCATGGAGGAGATCTCTTCAGGGTAGAAGCTCTTCGTCTCTC 6035 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGT 518462 || || |||| || | ||| || ||| || | | |||| || ||||||| Sbjct 6036 CTTTGTACTCAACTTGAACCTTTGGCTTTCCTCCATCACTGGTGACTTGGAAGGGCCAGT 6095 Query 518463 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 ||||| || ||||| || | | || | ||| | | || || | | || || | Sbjct 6096 GCTTCATGTCAGATTGTACGATAGGATCGTCAAACTTGCGGCCGATCAGCCTCTTGGCGT 6155 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 | || | || ||| | || || || || |||| | |||||| ||||||||||| || Sbjct 6156 CGAACACGGTGTTGTTGGGGTTCATAGCTACTTGGTTTTTGGCAGCATCTCCAATGAGCC 6215 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 ||||| ||||| || | ||||| || || || | || || || ||||| |||| Sbjct 6216 TCTCTGTGTCTGTGAAGGCCACATAGCTGGGGGTGGTCCTGTTTCCCTGGTCATTAGCAA 6275 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | || || ||||| |||| || | || ||||||||| | || || || | |||| Sbjct 6276 TGATCTCCACTTTTCCATGCTGAAACACTCCTACACAAGAGTAGGTAGTGCCCAGGTCAA 6335 Query 518703 TACCAATAGCAA 518714 | |||||||||| Sbjct 6336 TGCCAATAGCAA 6347 >seq179 Length=1632447 Score = 116 bits (128), Expect = 3e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || || ||||| |||| |||||| ||||||||||| || || |||| || |||| Sbjct 628348 TTCTTGTCCAGGCCATAGGCAATAGCAGCTGCAGTTGGTTCGTTGATGATTCGCAGAACA 628289 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||| ||| |||||||||| || ||||| || | || || || || || ||| Sbjct 628288 TTTAGTCCAGAAATGGTTCCTGCATCCTTTGTGGCCTGACGCTGAGAGTCATTGAAGTAT 628229 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||| || |||||||| |||| Sbjct 628228 GCAGGTACTGTAATAACTGCAT 628207 Score = 91.5 bits (100), Expect = 1e-12 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 || |||| | || ||| | || || | || |||||| ||| || ||||||||||||| Sbjct 627723 CACCAAACACTGTGTTGTTGGGGTTCAGGGCCACTTGATTTTTTGCAGCATCTCCAATCA 627664 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 | ||||| ||||| || | ||||| || || ||||| || || || ||||| | Sbjct 627663 GCCTCTCTGTGTCTGTGAAGGCGACATAACTGGGTGTGGTGCGGTTGCCCTGGTCATTGG 627604 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 518699 |||| ||||||||||| |||| || | || |||||||| | || || || | | Sbjct 627603 CAATGATTTCAACTTTGCCATGCTGAAAAACGCCTACACATGAGTAGGTGGTCCCGAGGT 627544 Query 518700 CAATACCAATAGC 518712 |||| ||||| || Sbjct 627543 CAATGCCAATTGC 627531 >seq19 Length=5720146 Score = 104 bits (114), Expect = 2e-16 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||| || || ||||| || || || ||| | || | |||||||||||| || ||||| Sbjct 640233 CAAAGATGGTGTTGGTGGGGTTCATGGCAACCTGGTTTTTGGCTGCATCACCGATCAGCC 640174 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 ||| | ||||| || | ||||| ||| || || | || ||||| ||||| |||| Sbjct 640173 TTTCGGAGTCTGTGAAAGCCACATAGCTTGGCGTGGTCCTGTTTCCTTGGTCATTGGCAA 640114 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||||||||||||| |||| || | || || ||||| | | || || || | ||||| Sbjct 640113 TAATTTCAACTTTGCCATGCTGGAAGACTCCAACACAGGAATAGGTGGTCCCCAGATCAA 640054 Query 518703 TACCAATAGC 518712 | |||| ||| Sbjct 640053 TGCCAACAGC 640044 Score = 104 bits (114), Expect = 2e-16 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||| || || ||||| || || || ||| | || | |||||||||||| || ||||| Sbjct 648235 CAAAGATGGTGTTGGTGGGGTTCATGGCAACCTGGTTTTTGGCTGCATCACCGATCAGCC 648176 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 ||| | ||||| || | ||||| ||| || || | || ||||| ||||| |||| Sbjct 648175 TTTCGGAGTCTGTGAAAGCCACATAGCTTGGCGTGGTCCTGTTTCCTTGGTCATTGGCAA 648116 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||||||||||||| |||| || | || || ||||| | | || || || | ||||| Sbjct 648115 TAATTTCAACTTTGCCATGCTGGAAGACTCCAACACAGGAATAGGTGGTCCCCAGATCAA 648056 Query 518703 TACCAATAGC 518712 | |||| ||| Sbjct 648055 TGCCAACAGC 648046 Score = 87.8 bits (96), Expect = 1e-11 Identities = 100/133 (75%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231 |||| ||||| || | ||||||||||| || |||||||| |||| || ||||| |||| Sbjct 621809 CAAG-CCATAAGCGATGGCAGCAGCAGTAGGCTCATTAATGATTCGCAGCACATTTAGAC 621867 Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291 | | ||| | || |||||||| ||||| || | || || |||||||| || || || | Sbjct 621868 CGGAGATTGTGCCAGCATCTTTGGTGGCCTGGCGCTGAGAGTCGTTAAAGTAAGCTGGCA 621927 Query 518292 CAGTAATAACGGC 518304 | || || || || Sbjct 621928 CTGTTATCACAGC 621940 Score = 87.8 bits (96), Expect = 1e-11 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 || |||| || || ||||| || || || || | || | ||||| ||||| ||||| | Sbjct 622449 CACCAAAGATTGTGTTGGTAGGGTTCATGGCCACCTGGTTCTTGGCAGCATCACCAATTA 622508 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 | ||| || || ||||| | ||||| ||| || || | || ||||| ||||| | Sbjct 622509 GCCTTTCAGTGTCAGTAAAGGCCACATAGCTTGGTGTGGTCCTGTTTCCTTGGTCATTTG 622568 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 518699 |||||||||||||||| |||| || | | || ||||| | || ||||| | || Sbjct 622569 CAATAATTTCAACTTTGCCATGCTGAAAGATCCCCACACAGGAGTATGTGGTTCCCAGAT 622628 Query 518700 CAATACCAATAGCAATTTTATCTGACAT 518727 |||| || | ||| || | |||||| Sbjct 622629 CAATTCCTACTGCAGTTCCCTTTGACAT 622656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3766753302931708