Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq58 109 6e-19 seq12 84.2 3e-11 >seq58 Length=3746050 Score = 109 bits (120), Expect = 6e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||||||| |||||||||| |||||||| |||| |||| || || || || Sbjct 1798182 CTCATCCTTACTGGTGTACTCTACGATTTCTGTGCACAGGTTGCTGGATTTGATAGTGCC 1798123 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || ||||| ||||| || || | ||||| |||||||| ||||||||||| || || || Sbjct 1798122 CAGATTCTGCTGGTTGCTTTTCCTATTGCAAGCATCCTTATAGAGCATGTAAGGAGTTCC 1798063 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 ||||| ||||| |||| | ||| || | ||||| Sbjct 1798062 AGTCTCTGTCTGAGACTCAATAATGGCATACCACA 1798028 >seq12 Length=6316961 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || || ||||||||||||||||||||||| ||||| || | | |||||||||||| Sbjct 2152951 TACTCTCCTACTCGCTTCTCAAAGAAGTTGGTTTTCCCCTCCAAGGAAATGTTTTCCATG 2153010 Query 117046 AAGTCAAATGGATTCT 117061 |||||||| || |||| Sbjct 2153011 AAGTCAAAGGGGTTCT 2153026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587889922794320