Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq30 91.5 3e-13 >seq30 Length=4849498 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| || || | || | ||| | ||| | ||||| || || || || Sbjct 2502236 ATACCTCCTCTGAGACGCAGGACAAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCA 2502295 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || |||||||| || |||||||| || | | ||||||||||||| Sbjct 2502296 GAGAGGGTGCGACCATCCTCCAATTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGT 2502355 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||||||||| || || || ||||| || || || | || Sbjct 2502356 GGAATGCCCTCTTTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 2502415 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || ||||| ||||| |||||||| | || || | || |||||||| || Sbjct 2502416 ACCTCCAGAGTGATGGTCTTACCAGTCAGCGTCTTCACAAAGATCTGCATCTT 2502468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901928220644400