Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq11 118 9e-22 seq171 95.1 1e-14 >seq11 Length=6590089 Score = 118 bits (130), Expect = 9e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || || ||||| || |||||||| || || |||| |||||||||||| ||||| ||||| Sbjct 5214835 AGGTCTGTCTCGGGATTGTCACACTCTGGGCACAGCACAAACTTGCGAATGAATCCATCC 5214776 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||||| || || |||||||||||||| || ||| | || || || || Sbjct 5214775 AGCATGTCCTGTAGTTTGTTGGCCTCGTGGGAGCCGTTCACTATGTAGCGGTCATTCTTC 5214716 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 | || | ||| || || || || ||||| || ||||| |||| || || Sbjct 5214715 GAGTCAAACTGGGTCTGTGCCCCTAGCTCACAGCCGAAAAACTTGGTTGG 5214666 >seq171 Length=1730840 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || || || || |||||||| || ||||||| |||||||||||| ||||| ||||| ||| Sbjct 1687521 TCGGTTTCTGGATTGTCACACTCAGGACACAGCACAAACTTGCGAATGAATCCATCCAGC 1687580 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 | ||| || | || | || || || || ||||| ||| | || || || ||| | Sbjct 1687581 ATGTCTTGCAGTTTGTTTGCCTCATGAGATCCATTGACAATGTAGCGGTCATTCTTGGCA 1687640 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || | ||| || || || |||| ||| || || ||| |||| || || Sbjct 1687641 TCAAACTGAGTCTGGGCTCCCAACTCACAGCCAAAGAACTTGGTGGG 1687687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411415077198374