Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq168 91.5 3e-13 >seq168 Length=1764021 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGA-TAGAATACTTAGATACAGTGTTTTTCATACTTAG 58443 |||||||| | | | || ||||||| |||| ||| | || |||||||||||||| || | Sbjct 1748732 TGGTGGTATTTTGTCTC-AAAGGGAGTAGAGTACCTGGACACAGTGTTTTTCATCCTACG 1748674 Query 58444 GAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTT 58503 || ||||| || ||||| |||||| | ||||| ||||| || | || ||||| || | Sbjct 1748673 TAAGAAGTTCAACCATGTCAGCTTTTTGCACGTTTATCACCACTGCACCATGTTCACCCT 1748614 Query 58504 AGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | ||| | || || || ||| |||| || || ||| Sbjct 1748613 CTGGTGGATTGGCATCAAGTGGGTTGCCGGTGGACAG 1748577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 900209533292480