Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq3907 98.7 3e-16 >seq3907 Length=4021 Score = 98.7 bits (108), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 38514 GTCCCCCCGGCGGTAGGCGCCTTCCACCTTGCTTTCCACTGCGTGCGCCAGCGCCATCTC 38573 ||| || |||||||||||| | || |||||||| | | ||| || || |||||||| Sbjct 1213 GTCGCCTCGGCGGTAGGCGGCCTCGACCTTGCTGCTGATCGTGTGGGCGAGTGCCATCTC 1154 Query 38574 GGCGAGCGAGTCTGGGTATTCGGTGCACTCGGCCACCCAGTCGCGGAACGTCGACCGGAA 38633 | | | | || || | || |||||||| ||||||| ||||| ||||| || || Sbjct 1153 GACCACTTCATTCGGATAATTCGTACACTCGGCAGCCCAGTCTCGGAAGGTCGAGCGTAA 1094 Query 38634 GCCGTGCACGGT--GATCCCTTCGTAGCCCATGCGGTCGAGCATGTTCAGCATGGCCATG 38691 ||||||| |||| | ||| |||| ||||||||||| | || ||||||||||| Sbjct 1093 GCCGTGCGCGGTCAGGTCCGATCGT--CCCATGCGGTCCAACAACGCGAGCATGGCCATA 1036 Query 38692 TTCGATAGCGGCTTG 38706 || ||||||||| Sbjct 1035 TTACTGAGCGGCTTG 1021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127454240492624