Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq82245 116 3e-21 seq155987 113 4e-20 seq30 111 1e-19 seq241 109 5e-19 seq202961 86.0 6e-12 >seq82245 Length=399 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || || || Sbjct 293 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAA 234 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||||| || ||||||||| |||||| ||||| | Sbjct 233 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 174 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || || | || ||||| Sbjct 173 CTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 114 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 113 GAAGATCTGCAT 102 >seq155987 Length=309 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || || || Sbjct 86 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAA 145 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||||| || || |||||| |||||| ||||| | Sbjct 146 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACGTT 205 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || || | || ||||| Sbjct 206 CTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 265 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 266 GAAGATCTGCAT 277 >seq30 Length=4849498 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2501819 TCTTTCTGAATGTTGTAGTCAGAGAGGGTGCGTCCATCCTCCAGCTGCTTTCCAGCAAAG 2501878 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | |||| || ||| || || ||||| ||| | | | Sbjct 2501879 ATCAGACGCTGCTGGTCAGGTGGAATGCCCTCTTTATCTTGAATCTTGGCCTTGACATTC 2501938 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | |||||||||| ||||| || ||||| |||| || |||||| Sbjct 2501939 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAGCGTCTTCACA 2501998 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2501999 AAGATCTGCAT 2502009 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2501590 CTCCTTTTGGATGTTGTAGTCAGAAAGGGTACGACCATCTTCCAGCTGCTTGCCAGCAAA 2501649 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| || ||| || || ||||| ||| | | Sbjct 2501650 GATCAGACGCTGCTGGTCAGGTGGAATGCCCTCTTTATCTTGAATCTTGGCCTTGACGTT 2501709 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| || || || ||||| |||| || ||||| Sbjct 2501710 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTACCAGTCAGCGTCTTCAC 2501769 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2501770 AAAGATCTGCAT 2501781 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2502047 TCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCCTCCAGCTGCTTTCCAGCAAAG 2502106 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | |||| | ||| || || ||||| ||| | | | Sbjct 2502107 ATCAGACGCTGCTGGTCAGGTGGAATACCCTCTTTATCTTGAATCTTGGCCTTGACATTC 2502166 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | |||||||||| ||||| || ||||| |||| || |||||| Sbjct 2502167 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAGCGTCTTCACA 2502226 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2502227 AAGATCTGCAT 2502237 >seq241 Length=1227248 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || || || Sbjct 301082 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAA 301023 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||||| || || |||||| |||||| ||| | | | Sbjct 301022 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATT 300963 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| || || || || | || ||||| Sbjct 300962 CTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 300903 Query 35725 AAATATCTGCATT 35737 || ||||||||| Sbjct 300902 GAAGATCTGCATT 300890 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || || || Sbjct 301310 CTCCTTCTGGATGTTGTAGTCAGATAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAA 301251 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||||| || || |||||| |||||| ||||| | Sbjct 301250 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACGTT 301191 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || || | || ||||| Sbjct 301190 CTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 301131 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 301130 GAAGATCTGCAT 301119 >seq202961 Length=268 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || ||||||||||| || || || |||| || ||||||||| | ||||| || || ||| Sbjct 256 TCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTG 197 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| |||||| ||||| | | | |||||||| | || ||||| | ||||| Sbjct 196 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATG 137 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || || | || ||||| || |||||||| Sbjct 136 GTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449195998751440