Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq30 89.7 4e-13 >seq30 Length=4849498 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| || || | |||| || | ||| | || || || ||||| || |||||||| Sbjct 2501552 TTGCCCCCACGGAGACGCAGAACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCA 2501611 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | | | || | ||||| ||||| || || || | || |||||||| || || || Sbjct 2501612 GAAAGGGTACGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGT 2501671 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||||||||| |||||| || | | | || | ||||| ||| || Sbjct 2501672 GGAATGCCCTCTTTATCTTGAATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 2501731 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || || || || || | || || ||||| || ||||||||||| |||||| || || Sbjct 2501732 ACCTCCAGGGTAATGGTCTTACCAGTCAGCGTCTTCACAAAGATCTGCATACCTCCT 2501788 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| || | ||| | || || ||||| ||||| |||||||| | | |||| | Sbjct 2502023 CGCAGGACAAGATGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCA 2502082 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || || | || |||||||| || || || || | |||||||||| Sbjct 2502083 TCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGAATACCCTCTTTA 2502142 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| || | | || | ||||| ||| || || || || || || Sbjct 2502143 TCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 2502202 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 | || || ||||| || ||||||||||| |||||| || || Sbjct 2502203 GTCTTACCAGTCAGCGTCTTCACAAAGATCTGCATACCTCCT 2502244 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| || | ||| | || || ||||| ||||| |||||||| | | |||| | Sbjct 2501795 CGCAGGACAAGATGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAGAGGGTGCGTCCA 2501854 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || || | || |||||||| || || || || | ||||||||| Sbjct 2501855 TCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGAATGCCCTCTTTA 2501914 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| || | | || | ||||| ||| || || || || || || Sbjct 2501915 TCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 2501974 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 | || || ||||| || ||||||||||| |||||| || || Sbjct 2501975 GTCTTACCAGTCAGCGTCTTCACAAAGATCTGCATACCTCCT 2502016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423466092032016