Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq58 100 4e-16 >seq58 Length=3746050 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||||||| |||||||||| |||||||| || | |||| || || || || Sbjct 1798182 CTCATCCTTACTGGTGTACTCTACGATTTCTGTGCACAGGTTGCTGGATTTGATAGTGCC 1798123 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || ||||| ||||| || ||| | ||||| |||||||| ||||||||||| || || || Sbjct 1798122 CAGATTCTGCTGGTTGCTTTTCCTATTGCAAGCATCCTTATAGAGCATGTAAGGAGTTCC 1798063 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||| ||||| || | | ||| || | ||| Sbjct 1798062 AGTCTCTGTCTGAGACTCAATAATGGCATACCA 1798030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625806270292800