Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq45 113 6e-20 >seq45 Length=4121683 Score = 113 bits (124), Expect = 6e-20 Identities = 271/403 (67%), Gaps = 13/403 (3%) Strand=Plus/Minus Query 13683 GAAGAGGTCGAGT--TTCCCA-TCGCCTACTCGATCGTGATCCACCACAAGATCGAGATG 13739 ||||||| ||| |||||| | || || || || || ||||||||||| | ||| Sbjct 3253227 GAAGAGGAAGAGGCCTTCCCACTGGCATATTCCATTGTTGTCCACCACAAGGTGCAGAAT 3253168 Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799 |||||| | ||| || | |||| ||||| || |||||| | || ||| |||| |||||| Sbjct 3253167 TTCGAGTGGCTCTTGCGCTCCATTTACGCTCCTCAGAACTTTTATTGCATCCATGTGGAC 3253108 Query 13800 TCCAAGTCCGGCGACGAGTTCA---TCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCT 13856 ||| | | | |||| || | | || ||||| | | ||||| | Sbjct 3253107 AAAAAGAGC--CCA-GAGTCCACTGTAAAAGCAATCAATGCCATTGTCTCCTGCTTTGAT 3253051 Query 13857 AACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAG 13916 ||||| | | ||| | |||| | || ||||| || | ||||||||| || || Sbjct 3253050 AACGTTTTCATAGCCAGTCAGCTGGAAGAGGTGGTCTATGCTAGCTGGAGTCGTGTCCAA 3252991 Query 13917 GCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAG--TGGAGGTACCTGC 13974 || ||||| | ||||||| |||||| || || | || | |||| ||| | Sbjct 3252990 GCTGACCTTAACTGCATGAAGGACCTTTAC--CTGATCAGTGATCGTTGGAAATACTTAA 3252933 Query 13975 TCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGA 14034 | ||||||||||| |||||| || |||| |||||||||||||| ||||| || || | Sbjct 3252932 TTAACCTGTGCGGACAGGACTTGCCCATCAAAACCAACCTGGAGATGGTGCGTGCCCTTA 3252873 Query 14035 AGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCC 14077 | | ||||| || ||| |||||||| |||| |||||| Sbjct 3252872 AAGAACTGGGTGGTGGTAACAGCCTGGAGACCGAGTCCATGCC 3252830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656404644743680