Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq58 111 2e-19 seq12 93.3 6e-14 >seq58 Length=3746050 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || |||||||| || | ||||||||| ||||||||||||||||| || || || || ||| Sbjct 1796381 GTGCCTGCATTGAAGAGTGTAGGAGAAGCATGAGTGAACCATTTCTCTGACAGCAGGTTG 1796322 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || || ||||| | || | |||||| || ||| || || || ||||| | ||||| | Sbjct 1796321 TAGGTCTCAATGGCAGCAGCAATATCCTCTTTATGGATCCCAACTGCGACTCTCATCAGC 1796262 Query 77114 ATATGCTGAGGTCGTTCTACA 77134 || |||||||| || ||| || Sbjct 1796261 ATGTGCTGAGGACGCTCTGCA 1796241 Score = 102 bits (112), Expect = 1e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| || || || |||||||| || || ||| ||| | || ||||| ||||| |||| Sbjct 1800552 TCCAGCCATAAAAGTGCATGCTAGTGAGCTTGCCGTAATTGGGCTCGGCAATATGGATAT 1800493 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 | | ||||| ||||| || |||||||| ||||||||||| ||||| || || | || Sbjct 1800492 TGAGGGACTGGCTTTGGTCAATGAAAGCCCCTCTATCAGCAGCCATCTTAATGACCACCT 1800433 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 75612 | |||| ||| ||||| | ||| || | | | ||| | |||||||| Sbjct 1800432 TCTGAGAAATCTCCCACACAGTCTTATACAACTCTTTCAGGTCATCTGG 1800384 >seq12 Length=6316961 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| || || | || || || || |||||||||||||| || || | ||| || Sbjct 2154513 TCATCTCTGCTGATAAGCTCATTGGAGAACGTGAGCCCAGGCATGAGGCCCCTCTTCTTT 2154572 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| || ||||| || ||||| ||||| || || || || || ||||| || || || Sbjct 2154573 AGCCAGAAGATAGCAGCAAAAGAACCAGAGAAAAAGATTCCCTCCACAGCAGCAAAGGCC 2154632 Query 46774 ACAAGTCTCTCTCC 46787 || | |||||| || Sbjct 2154633 ACCACTCTCTCACC 2154646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710407778309760