Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq19930 141 1e-28 >seq19930 Length=820 Score = 141 bits (156), Expect = 1e-28 Identities = 206/288 (72%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||||||| | || || || ||||| ||| | | | || || | | ||| || || Sbjct 184 ACCTGTAACTATTCAATACCCCTACGAAAAATTGCTCACATCGGAACGTTTCCGAGGCCG 243 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 || |||| ||| ||||| || || || |||||||| || ||||| | ||||| ||||| Sbjct 244 AATCCACTTTGAATTTGATAAATGCATTGCCTGTGAAGTATGTGTTCGTGTATGTCCTAT 303 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATG--AACAAACAG-ACAAAGAAGAAAGAACTTAG 19471 ||||||| || || |||||| || ||| || | | |||||| || ||||| Sbjct 304 AGATCTACCTGTTGTTGATTGGAAATTGGAAACGAATATTAGAAAGAAACAATTACTTA- 362 Query 19472 AAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCC 19531 |||| || || |||||| ||||| || || ||||| || || |||||||| || Sbjct 363 --ATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGTGTTGAGTATTGTCC 420 Query 19532 AACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 421 AACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603073832296320