Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq19930 159 4e-34 >seq19930 Length=820 Score = 159 bits (176), Expect = 4e-34 Identities = 240/341 (70%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||||| || |||| || || || |||||||| | | || || | | |||| | Sbjct 184 ACCTGTAACTATTCAATACCCCTACGAAAAATTGCTCACATCGGAACGTTTCCGAGGCCG 243 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || |||| ||| ||||||||||| ||||| |||||||||||||| | || |||||||| Sbjct 244 AATCCACTTTGAATTTGATAAATGCATTGCCTGTGAAGTATGTGTTCGTGTATGTCCTAT 303 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGAAA 188816 || ||||||| ||||||||| | || | | | | || ||||| || | || Sbjct 304 AGATCTACCTGTTGTTGATTGGAAATTGGAAACGAATATTAGAAAGAAACAATTACTTAA 363 Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876 ||| ||||| ||||| || || || ||||| |||||||| || || |||||||| Sbjct 364 TTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGTGTTGAGTATTGTCCAAC 423 Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACTCAA 188936 || ||| |||| ||||| ||||| |||||||| ||| || ||| | || || | || Sbjct 424 AAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAA 483 Query 188937 CTATGATAATGTAGCTCTTGGTAGATTACCTACCAATGTCA 188977 ||| || | | ||| | ||| | | ||||||||||| Sbjct 484 TTATAATCAAATTGCTTTAGGTCGGT----TACCAATGTCA 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 630987166277160