Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq15661 113 1e-19 seq54328 93.3 1e-13 >seq15661 Length=15102 Score = 113 bits (124), Expect = 1e-19 Identities = 130/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 |||| || || ||| ||||||| ||||| ||||| || ||||||||| | || || || Sbjct 7851 TTTATAATGTAATTGTTACGGCACATGCTTTTGTAATAATTTTCTTTATAGTAATACCAA 7910 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 ||||||| || || || || || ||| | || ||| | || |||||||| || || || | Sbjct 7911 TTATGATTGGAGGCTTTGGGAACTGACTAGTGCCTCTTATAATTGGTGCACCCGACATAG 7970 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 |||| || | | ||||||||||| || ||| | || || ||||| || |||| Sbjct 7971 CTTTCCCTCGAATAAACAATATAAGCTTCTGACTCCTCCCCCCTTCATTCCTTCT 8025 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||||||||| ||||||||||||||||| |||||||| || || ||||| || | Sbjct 8419 TTCAGGATGACCAAAGAATCAGAATAAATGTTGGTAAAGGATGGGGTCCCCTCCTCCAGC 8360 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTC 370760 || ||||| ||| | ||||||| |||| Sbjct 8359 AGGGTCAAAGAAGGTTGTATTAAGGTTTC 8331 >seq54328 Length=2135 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||||||| ||||| ||||| || || ||||||||||| |||||||| |||||||| || Sbjct 745 AATATTTGTCCATCGGTAATGGAAATTACATTTGTAGGAATATAAGCCGAAACATCTCCC 804 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGT 4559 | ||| ||||| || | ||||||||| || Sbjct 805 GATTGAGTTTCCACTATAGGTAAGGCGGT 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191679363411194