Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq15530 140 2e-28 >seq15530 Length=6100 Score = 140 bits (154), Expect = 2e-28 Identities = 155/204 (76%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 69117 ATGCAGGTCATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATG 69176 |||||||| || ||| || | ||| || ||| | ||||||| ||||||| |||||| Sbjct 3232 ATGCAGGTTATTGGTGTGGTAAAGGGCACCTCATGTCCATGTGACGAGCTTGTGCTGATG 3173 Query 69177 ACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAAC 69236 || || |||||| | ||| ||||||||||||||||||| ||||||||| |||||||| | Sbjct 3172 ACGTGTGAGGACAAAAAGCTGTACGGCTATGACGGAGAGGAGCTGCATCTGGTGGCTTCC 3113 Query 69237 TGT---CTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTAT 69293 || ||||| | ||| | || | | |||| ||||| |||| | || |||| || Sbjct 3112 AGTTTCCTGGAAC-TATGTGACAAAACG--ATAGAGTATCCAGCATCCAAGCGCTACTAC 3056 Query 69294 CATGGGGAGGCCTTCAAACATATG 69317 |||| |||||||||||| ||||| Sbjct 3055 AATGGAGAGGCCTTCAAAGATATG 3032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369256132674881