Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 4e-15 >seq6 Length=87043187 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||||||||| || || | |||||||| || || || || ||||| || || | ||| | Sbjct 51008541 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTTAGGCCTGGCATGAGCCCCCTCTTCT 51008482 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| || |||| ||||| || ||||||||||| || || || || || ||||||| Sbjct 51008481 TTAGCCAGAAAATGGCAGCAAAGGAGCCAGAAAAGAAGATCCCCTCAACAGCTGCAAAGG 51008422 Query 24277 CAA 24279 ||| Sbjct 51008421 CAA 51008419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591998657024400