Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq19 89.7 5e-13 >seq19 Length=82978132 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/166 (72%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 20233 TCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAA 20292 || ||| || || | || || | ||| || || | || || |||||||| ||||| || Sbjct 29462968 TCCAAGTCCTGTGATGTGGGCGATCATGTAGGTGAGGATGGCGTAGCTGGCGATGTTGAA 29462909 Query 20293 AGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTC 20352 || |||||| |||||||| ||||| | |||||||||||| || | |||| ||||| Sbjct 29462908 GGGCACTCCCTGGCCCATGTCCCCCGAGCACTGATACAGCTGGCACGGCAGCTTCCCGTC 29462849 Query 20353 AGCTACATAAAATTGACATAACAAGTGACA-GGGCGGAAGCGCCAT 20397 | ||| || || ||||| | || || ||| ||||||||||| Sbjct 29462848 AATTACGTACAACTGACACAGGGCATGGCAGGGGGGGAAGCGCCAT 29462803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440091963720200