Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4 143 3e-29 seq13 141 9e-29 seq11 134 1e-26 seq1 131 2e-25 >seq4 Length=82398023 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | Sbjct 51880605 AAAGATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTGGAGCC 51880664 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 || |||| | | | | | || | || |||| ||||| ||||| || ||| | || Sbjct 51880665 CAGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGA 51880724 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | ||| || || |||||||| |||| ||||||||| |||||| Sbjct 51880725 CCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTA 51880784 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| || || | || || ||| | ||||||||| | || || ||| Sbjct 51880785 CAACATCCAGAAAGAGTCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGGC 51880836 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || || ||| ||| Sbjct 51880837 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAAACCATAACCCTTGAGGTGGAGCCCAGT 51880896 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 51880897 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 51880956 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| ||||||||| |||||||||| Sbjct 51880957 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 51881016 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || || ||| | ||||||||| | || || ||| Sbjct 51881017 ATCCAGAAAGAGTCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGGC 51881064 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || || ||| ||| Sbjct 51881065 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAAACCATAACCCTTGAGGTGGAGCCCAGT 51881124 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 51881125 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 51881184 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| ||||||||| |||||||||| Sbjct 51881185 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 51881244 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || || ||| | ||||||||| | || || ||| Sbjct 51881245 ATCCAGAAAGAGTCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGGC 51881292 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || || ||| ||| Sbjct 51881293 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAAACCATAACCCTTGAGGTGGAGCCCAGT 51881352 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 51881353 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 51881412 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| ||||||||| |||||||||| Sbjct 51881413 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 51881472 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || || ||| | ||||||||| | || || ||| Sbjct 51881473 ATCCAGAAAGAGTCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGGC 51881520 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || || ||| ||| Sbjct 51881521 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAAACCATAACCCTTGAGGTGGAGCCCAGT 51881580 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 51881581 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 51881640 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| ||||||||| |||||||||| Sbjct 51881641 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 51881700 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || || ||| | ||||||||| | || || ||| Sbjct 51881701 ATCCAGAAAGAGTCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGGC 51881748 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || || ||| ||| Sbjct 51881749 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAAACCATAACCCTTGAGGTGGAGCCCAGT 51881808 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 51881809 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 51881868 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| ||||||||| |||||||||| Sbjct 51881869 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 51881928 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || || ||| | ||||||||| | || || ||| Sbjct 51881929 ATCCAGAAAGAGTCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGGC 51881976 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || || ||| ||| Sbjct 51881977 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAAACCATAACCCTTGAGGTGGAGCCCAGT 51882036 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 51882037 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 51882096 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| ||||||||| |||||||||| Sbjct 51882097 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 51882156 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || ||| | ||||||||| | || || || Sbjct 51882157 ATCCAGAAAGAGTCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGG 51882203 >seq13 Length=107758822 Score = 141 bits (156), Expect = 9e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| || || || || ||||| ||||||||| |||| || ||| | Sbjct 72693079 AAAGATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCC 72693020 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358 | ||||| | | | | | || | || |||| ||||| ||||| || |||||| | Sbjct 72693019 AAGCGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCAG 72692961 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||| |||| || | ||| ||||| |||||||| || | ||||||||| |||| Sbjct 72692960 ACCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGACT 72692901 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| || ||| | || || ||| | ||||||||| | || || || Sbjct 72692900 ACAACATCCAGAAAGAATCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGG 72692849 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| || ||| | | | Sbjct 72692847 ATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCAAGC 72692788 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||| | | | | | || | || |||| ||||| ||||| || |||||| ||||| Sbjct 72692787 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACCA 72692729 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| ||||| |||||||| || | ||||||||| |||||||| Sbjct 72692728 GCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGACTACAA 72692669 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || ||| | || || ||| | ||||||||| | || || || Sbjct 72692668 CATCCAGAAAGAATCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGG 72692621 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| || ||| | | | Sbjct 72692391 ATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCAAGC 72692332 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||| | | | | | || | || |||| ||||| ||||| || |||||| ||||| Sbjct 72692331 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACCA 72692273 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| ||||| |||||||| || | ||||||||| |||||||| Sbjct 72692272 GCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGACTACAA 72692213 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| || ||| | || || ||| | |||||||| Sbjct 72692212 CATCCAGAAAGAATCCACCCTCCATCTTGTGCTGCG 72692177 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| || ||| | | | Sbjct 72692619 ATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCAAGC 72692560 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||| | | | | | || | || |||| ||||| ||||| || |||||| ||||| Sbjct 72692559 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACCA 72692501 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| ||||| |||||||| || | ||||||||| || ||||| Sbjct 72692500 GCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGATTACAA 72692441 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || ||| | || || ||| | ||||||||| | || || || Sbjct 72692440 CATCCAGAAAGAATCCACCCTCCATCTTGTGCTGCGTCTCAGGGGAGG 72692393 >seq11 Length=93888508 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||||||| | || || ||| | | | Sbjct 55250353 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTGGAGGTTGAGCCGAGC 55250294 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 55250293 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 55250234 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||||||||| Sbjct 55250233 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACGCTCTCCGACTACAAC 55250174 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || ||| | ||||| ||| |||| || || Sbjct 55250173 ATCCAAAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGGGGAGG 55250127 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || |||||||| || || || || || ||||||||| | || |||||| || Sbjct 55250812 AAGATGCAGATCTTCGTAAAGACACTTACCGGAAAGACCATCACCCTAGAGGTCGAGCCC 55250753 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| ||||| ||||| || || | || Sbjct 55250752 AGTGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGA 55250694 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || || || || | ||| ||||| |||||||| || | ||||| ||| |||||| Sbjct 55250693 CCAGCAACGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTCTCCGACTA 55250634 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| | || || ||| | ||||| ||| |||| || || Sbjct 55250633 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGGGGAGG 55250583 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 55250581 ATGCAGATCTTTGTGAAGACCCTTACCGGCAAGACCATCACCCTAGAGGTGGAGCCCAGT 55250522 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 55250521 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 55250462 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||||||||| Sbjct 55250461 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACGCTCTCCGACTACAAC 55250402 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||| | ||||| ||| |||| || || Sbjct 55250401 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGGGGAGG 55250355 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||||||| | || || ||| | | Sbjct 55250125 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTGGAGGTTGAGCCGAGT 55250066 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 55250065 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 55250006 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||||||||| Sbjct 55250005 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTCTCCGACTACAAC 55249946 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || ||| |||| |||||| Sbjct 55249945 ATCCAGAAGGAGTCCACTCTTCATCTGGTCCTGCGT 55249910 >seq1 Length=159038749 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || ||||||||| | || || ||| ||| Sbjct 137746624 ATGCAGATCTTCGTTAAAACCCTGACTGGTAAGACCATCACCCTTGAGGTTGAGCCCAGT 137746683 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 137746684 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 137746743 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| |||||||| || | |||||||| |||||||||| Sbjct 137746744 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 137746803 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||| | ||||| ||| |||| || || Sbjct 137746804 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGGGGAGG 137746850 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || ||||||||| | || || ||| ||| Sbjct 137746852 ATGCAGATCTTCGTTAAAACCCTGACTGGTAAGACCATCACCCTTGAGGTTGAGCCCAGT 137746911 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 137746912 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 137746970 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || |||||||| || | |||||||| ||||||||| Sbjct 137746971 GCAGCGTCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 137747030 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||| |||| |||||| Sbjct 137747031 CATCCAGAAGGAGTCCACCCTTCATCTGGTCCTGCGT 137747067 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || || || || || ||||||||| | || || ||| || Sbjct 137746393 AAGATGCAGATCTTTGTGAAGACCCTAACTGGTAAGACCATCACCCTTGAGGTTGAGCCC 137746452 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| ||||| || ||| | ||| Sbjct 137746453 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGAC 137746512 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | || ||||| |||||||| || | |||||||| ||||||| Sbjct 137746513 CAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTAC 137746572 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||||| | || || ||| | ||||| ||| |||| || || Sbjct 137746573 AACATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGGGGAGG 137746622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498721329795200