Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq23 105 3e-17 >seq23 Length=49854004 Score = 105 bits (116), Expect = 3e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || ||||| || || ||||| ||||| | Sbjct 40743966 ATGCAGATATTCGTGAAGACGTTGACGGGGAAAACAATCACCCTTGAGGTTGAGCCCAGC 40744025 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || || || || ||||||||||| |||||||||||||| Sbjct 40744026 GATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAG 40744085 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || ||||||||||| ||||| | || ||| | || ||||| Sbjct 40744086 CAGCGTCTGATCTTCGCTGGCAAACAACTTGAGGATGGTCGCACCTTGTCAGACTATAAC 40744145 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | || || | || ||||| Sbjct 40744146 ATCCAGAAAGAGTCCACCCTTCA 40744168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1969841653402740