Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 5e-14 >seq6 Length=87043187 Score = 93.3 bits (102), Expect = 5e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||||||||| || || | || || || || |||| || ||||| || || || || | Sbjct 51008541 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTTAGGCCTGGCATGAGCCCCCTCTTCT 51008482 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 ||| |||||| || | |||||| || ||||||||||| || || || || |||||||| | Sbjct 51008481 TTAGCCAGAAAATGGCAGCAAAGGAGCCAGAAAAGAAGATCCCCTCAACAGCTGCAAAGG 51008422 Query 19103 CAAC 19106 |||| Sbjct 51008421 CAAC 51008418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560477595394200