Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq23 114 2e-20 >seq23 Length=49854004 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || || ||||| | || | |||||| || |||||||| || || || | | | Sbjct 40744180 CGCAGCACAAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCTGACAAGGTGCGACCA 40744121 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || || || || | | ||| ||||||||||| || ||||| ||| Sbjct 40744120 TCCTCAAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTA 40744061 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| || | |||| |||||||||| | |||||| || || || || Sbjct 40744060 TCCTGGATCTTGGCCTTGACATTTTCAATAGTATCGCTGGGCTCAACCTCAAGGGTGATT 40744001 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| || || | ||| || || ||||| ||||| || Sbjct 40744000 GTTTTCCCCGTCAACGTCTTCACGAATATCTGCATCTT 40743963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897043659159600