Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq15 84.2 4e-11 >seq15 Length=103963436 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 ||||||||||| || ||||| || | || || | ||||| ||||| ||||| || ||| Sbjct 38278967 TGGTGGTACTACATCTCTAAGGGAGTGGAGTATCTGGATACGGTGTTCTTCATCCTGAGG 38279026 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 | |||||||| || || ||||| || || || || ||||| | || ||||| | | Sbjct 38279027 AGGAAGTTTAACCAGGTCAGCTTCCTCCATGTCTACCATCACTGCACCATGTTCATCCTC 38279086 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | ||| | || || || ||| | ||||||| ||| Sbjct 38279087 TGGTGGATCGGAATCAAGTGGGTCCCAGGAGGACAG 38279122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 900789557160800