Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10]
232,155 sequences; 2,966,890,203 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 7e-28
seq13 131 4e-25
seq11 127 5e-24
seq1 120 7e-22
seq23 104 5e-17
>seq4
Length=82398023
Score = 140 bits (154), Expect = 7e-28
Identities = 171/231 (74%), Gaps = 7/231 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || |||||||| ||||||||||| |||| | ||
Sbjct 51880830 CCTGAGACGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT 51880771
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || |||||||||||||| || | ||||||||| | | ||| ||
Sbjct 51880770 GCGGCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 51880711
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 51880710 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 51880654
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTAC 152109
||| || || || ||||| ||||| ||||||||||||| |||||| |||||
Sbjct 51880653 AAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTTTAC 51880603
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || |||||||| ||||||||||| |||| | ||
Sbjct 51881058 CCTGAGACGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT 51880999
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || |||||||||||||| || | ||||||||| | | ||| ||
Sbjct 51880998 GCGGCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 51880939
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 51880938 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 51880882
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| || ||||| ||||| ||||||| ||||||
Sbjct 51880881 AAGGGTTATGGTTTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 51880837
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || |||||||| ||||||||||| |||| | ||
Sbjct 51881286 CCTGAGACGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT 51881227
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || |||||||||||||| || | ||||||||| | | ||| ||
Sbjct 51881226 GCGGCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 51881167
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 51881166 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 51881110
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| || ||||| ||||| ||||||| ||||||
Sbjct 51881109 AAGGGTTATGGTTTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 51881065
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || |||||||| ||||||||||| |||| | ||
Sbjct 51881514 CCTGAGACGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT 51881455
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || |||||||||||||| || | ||||||||| | | ||| ||
Sbjct 51881454 GCGGCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 51881395
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 51881394 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 51881338
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| || ||||| ||||| ||||||| ||||||
Sbjct 51881337 AAGGGTTATGGTTTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 51881293
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || |||||||| ||||||||||| |||| | ||
Sbjct 51881742 CCTGAGACGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT 51881683
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || |||||||||||||| || | ||||||||| | | ||| ||
Sbjct 51881682 GCGGCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 51881623
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 51881622 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 51881566
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| || ||||| ||||| ||||||| ||||||
Sbjct 51881565 AAGGGTTATGGTTTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 51881521
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || |||||||| ||||||||||| |||| | ||
Sbjct 51881970 CCTGAGACGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT 51881911
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || |||||||||||||| || | ||||||||| | | ||| ||
Sbjct 51881910 GCGGCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 51881851
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 51881850 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 51881794
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| || ||||| ||||| ||||||| ||||||
Sbjct 51881793 AAGGGTTATGGTTTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 51881749
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || |||||||| ||||||||||| |||| | ||
Sbjct 51882198 CCTGAGACGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT 51882139
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || |||||||||||||| || | ||||||||| | | ||| ||
Sbjct 51882138 GCGGCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 51882079
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 51882078 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 51882022
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| || ||||| ||||| ||||||| ||||||
Sbjct 51882021 AAGGGTTATGGTTTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 51881977
>seq13
Length=107758822
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||||| || |||||||| || || || ||||| ||||||||||| || | | ||
Sbjct 72692170 CCTGAGTCGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAGAGGGT 72692229
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || ||||||||||| |||||||||||||| | || ||| ||
Sbjct 72692230 GCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGGATGCC 72692289
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| |||| | | |||| ||| || || ||
Sbjct 72692290 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCAACCTCGAG 72692349
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || ||||| ||||||| ||||||
Sbjct 72692350 GGTGATGGTCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 72692391
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || || ||||| |||||||||||||| | | ||
Sbjct 72692398 CCTGAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCTGAGAGGGT 72692457
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || ||||||||||| |||||||||||||| | || ||| ||
Sbjct 72692458 GCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGGATGCC 72692517
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| |||| | | |||| ||| || || ||
Sbjct 72692518 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCAACCTCGAG 72692577
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || ||||| ||||||| ||||||
Sbjct 72692578 GGTGATGGTCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 72692619
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || || ||||| ||||||||||| || | | ||
Sbjct 72692854 CCTGAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAGAGGGT 72692913
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || ||||||||||| |||||||||||||| | || ||| ||
Sbjct 72692914 GCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGGATGCC 72692973
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| |||| | | |||| ||| || || ||
Sbjct 72692974 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCAACCTCGAG 72693033
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| || || ||||||||||||| |||||| ||
Sbjct 72693034 GGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCATCTT 72693078
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || |||||||| || || || ||||| ||||||||||| || | | ||
Sbjct 72692626 CCTGAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAGAGGGT 72692685
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || ||||||||||| |||||||||||||| | || ||| ||
Sbjct 72692686 GCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGGATGCC 72692745
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| |||| | | |||| ||| || || ||
Sbjct 72692746 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCAACCTCGAG 72692805
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || ||||| ||||||| ||||||
Sbjct 72692806 GGTGATGGTCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 72692847
>seq11
Length=93888508
Score = 127 bits (140), Expect = 5e-24
Identities = 158/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||||||||| ||||| || ||||||||||| |||| | ||| | ||||||
Sbjct 55249914 AGGACCAGATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCT 55249973
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 55249974 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 55250033
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 55250034 TGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTCGGCTCAACCTCCAGGGTGATG 55250090
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||||||||||| ||||||
Sbjct 55250091 GTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 55250125
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| |||||||| || || ||||| |||||||||||||| |||| | ||
Sbjct 55250132 CCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGCGT 55250191
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || || |||||||| || | ||||||||| | | ||| ||
Sbjct 55250192 GCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 55250251
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || |||||| |||| | | |||| ||| || || ||
Sbjct 55250252 CTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTCGGCTCAACCTCCAG 55250311
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || ||||||||||||| ||||||
Sbjct 55250312 GGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 55250353
Score = 118 bits (130), Expect = 2e-21
Identities = 162/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| |||||||| || || ||||| || ||||||||||| |||| | ||
Sbjct 55250360 CCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGT 55250419
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || || |||||||| || | ||||||||| | | ||| ||
Sbjct 55250420 GCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 55250479
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 55250480 CTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 55250536
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || |||||||| |||| ||||||
Sbjct 55250537 TAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 55250581
Score = 111 bits (122), Expect = 4e-19
Identities = 162/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| |||||||| || || ||||| || ||||||||||| |||| | |||
Sbjct 55250588 CCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGT 55250647
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || || |||||||| || | |||||||| | | ||| ||
Sbjct 55250648 GCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATGCC 55250707
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 55250708 CTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCGACCTC 55250764
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || || ||||| ||||||| |||||| ||
Sbjct 55250765 TAGGGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAGATCTGCATCTT 55250812
>seq1
Length=159038749
Score = 120 bits (132), Expect = 7e-22
Identities = 164/228 (72%), Gaps = 6/228 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| |||||||| || || ||||| || ||||||||||| |||| | ||
Sbjct 137746617 CCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT 137746558
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || ||||| ||||| || | ||||||||| | | ||| ||
Sbjct 137746557 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 137746498
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 137746497 CTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCAACCTC 137746441
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || || || || || || || |||||||| |||| |||||| ||
Sbjct 137746440 AAGGGTGATGGTCTTACCAGTTAGGGTCTTCACAAAGATCTGCATCTT 137746393
Score = 114 bits (126), Expect = 3e-20
Identities = 161/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| |||||||| || || ||||| || ||||||||||| |||| | ||
Sbjct 137746845 CCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT 137746786
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || ||||| ||||| || | ||||||||| | | ||| ||
Sbjct 137746785 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 137746726
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 137746725 CTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCAACCTC 137746669
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || || || || || || || ||||||| ||||||
Sbjct 137746668 AAGGGTGATGGTCTTACCAGTCAGGGTTTTAACGAAGATCTGCAT 137746624
Score = 107 bits (118), Expect = 4e-18
Identities = 156/217 (72%), Gaps = 10/217 (5%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| |||||||| || ||||| || ||||||||||| |||| | || | ||||||
Sbjct 137747063 AGGACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 137747004
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || || ||||| || | ||||||||| | | ||| || ||||| |
Sbjct 137747003 TCCAGCTGCTTT--CCAGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGT 137746946
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067
| || || || ||||| |||| | | |||| ||| ||| || ||||| || |
Sbjct 137746945 CCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCAACCTCAAGGGTGA 137746889
Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || || || || || ||||||| ||||||
Sbjct 137746888 TGGTCTTACCAGTCAGGGTTTTAACGAAGATCTGCAT 137746852
>seq23
Length=49854004
Score = 104 bits (114), Expect = 5e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||||||||| || |||||||| |||||||| || || | || || | |||||
Sbjct 40744177 AGCACAAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCTGACAAGGTGCGACCATCC 40744118
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| || |||||||| || | |||||| || | | || |||||||| ||
Sbjct 40744117 TCAAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTATCC 40744058
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
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Sbjct 40744057 TGGATCTTGGCCTTGACATTTTCAATAGTATCGCTGGGCTCAACCTCAAGGGTGATTGTT 40743998
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
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Sbjct 40743997 TTCCCCGTCAACGTCTTCACGAATATCTGCATCTT 40743963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150388776256005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |