Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq89222 96.9 2e-15 >seq89222 Length=38626 Score = 96.9 bits (106), Expect = 2e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 102038 TATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT 102097 || ||||| || || || ||||||||||| ||||| ||||| ||||| ||||| || ||| Sbjct 34839 TACTCTGCCCCAAAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTCTCCCTCCTCT 34898 Query 102098 CTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGC 102157 | |||| ||| ||| || || | || | ||| ||||| ||||||||||| | | Sbjct 34899 CGGTCAGTAAACCCACCCTTGTCCAGGAAGTCACGAGAACCATTGGCATCCCAAATCTTC 34958 Query 102158 ACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCC 102195 || || ||| || ||||||||| | |||||||| Sbjct 34959 ACTCCTTTTGCAGAGAGCTCTTTGGCATTGGTAGATCC 34996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360564177435044