Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq130048 86.0 9e-12 >seq130048 Length=4274 Score = 86.0 bits (94), Expect = 9e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || ||||| || || | ||| |||| | | | Sbjct 2603 ATGCAAATCTTTGTCAAGACCCTCACCGGTAAAACCATCACCCTTGAGGTTGAGCCCAGT 2544 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || || ||||| || || || || || || ||||| Sbjct 2543 GACACTATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGATCAG 2484 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||| || ||||| | |||||| | || || | || || || Sbjct 2483 CAGAGGCTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACTCTCTCCGACTACAAC 2424 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||||||||| | || || || | || | |||||||||| Sbjct 2423 ATCCAGAAAGAATCAACCCTTCACTTAGTCCTGCGCCTCAGAGGTGGTAT 2374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753982445299200