Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq89222 86.0 5e-12 >seq89222 Length=38626 Score = 86.0 bits (94), Expect = 5e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT-TGCTAATAATGAATTGTC 20459 |||||| |||| || || ||| || || || || || || ||| | | ||| |||| Sbjct 34530 ATGGCTCTGCCCCCGTGCCATGCTCTTTGTCAGTTCTATGTGTGCGA-TGGTGAGCTGTC 34472 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 || || | ||||| || || | ||| ||||| ||||| || |||||||||||||| || Sbjct 34471 TTGCCAGCTTTATCAGCGCTCTGGTGACATGGGTCTGGGAGTACCTTTCAATATTGCCAG 34412 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 ||||| || || || |||||||| || || | |||| ||||| Sbjct 34411 CTATGCACTTCTAACATATATGATCGCCCACATCACAGGACTAAAA 34366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398424837357580