Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq62746 89.7 4e-13 >seq62746 Length=64918 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || || || || ||| | || || || ||||| || || | ||||| Sbjct 62143 TCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGGCCAGGCATTAGACCCCTCTTTTTC 62084 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | |||| | ||||||||||| || || || || || ||||| || || ||||||||||| Sbjct 62083 AGCCAATAAATAGCAGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAACGCC 62024 Query 13295 ATCAACCTTTCACC 13308 | | |||||||| Sbjct 62023 ACAATTCTTTCACC 62010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430162763597688