Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq89222 105 5e-18 >seq89222 Length=38626 Score = 105 bits (116), Expect = 5e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| ||||||||||| || || | |||||||| || || || || || || ||||| Sbjct 34829 CATGTTTGTGTACTCTGCCCCAAAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTC 34888 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 ||| || || | || ||| || | ||| |||| ||||| | ||||||||||| || Sbjct 34889 TCCCTCCTCTCGGTCAGTAAACCCACCCTTGTCCAGGAAGTCACGAGAACCATTGGCATC 34948 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||| ||||| || || || | ||||||||||||| || || || || Sbjct 34949 CCAAATCTTCACTCCTTTTGCAGAGAGCTCTTTGGCATTGGTAGATCC 34996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339490730989212