Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq37454 82.4 9e-11 >seq37454 Length=405 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 |||||| | ||| | ||| || | ||||||||||| |||| |||||||| | Sbjct 236 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 295 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | |||| | ||||| || || |||||||| | || || | Sbjct 296 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCTTTCATTGCTGCCC 354 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTA 166218 |||| || ||||| ||||| || ||||| || || | || |||||| Sbjct 355 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTA 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566125585622400