Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq89243 95.1 1e-14 >seq89243 Length=32234 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 || ||||||| ||| ||||| ||||||| |||||||| |||||||| || |||||| Sbjct 16103 CATGGTGTGAGGAACAGCCTGCTCCTGGCCCCGATGCCCACAGCCTCCACTGCCCAGATC 16044 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 ||||||||||| ||||| | || || | |||| |||| | |||| | ||||||| Sbjct 16043 CTTGGCAACAATGAGTCCATTGAGCCTTACACCAGCAACATTTACACTCGCAGGGTGCTT 15984 Query 95197 GCCGGGGAATTCCCCGTCATCAACA 95221 | ||||| || | |||| || || Sbjct 15983 TCAGGGGAGTTTCAGGTCAGCACCA 15959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493758217662240