Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12-
02] 156,044 sequences; 695,008,792 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq130048 96.9 3e-15
>seq130048
Length=4274
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | ||| | | | || || || || ||||||||||||
Sbjct 2148 GCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 2207
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || ||| || || || || |||| | |||| || | ||| || || |||||
Sbjct 2208 GAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGAGG 2267
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | ||| | ||||||| | | ||||||
Sbjct 2268 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCGCTGGGCTCCAC 2327
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || ||||| || ||||| ||||| ||||||||
Sbjct 2328 CTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2375
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| ||||| || | | |||| || || || |||||||||||| | ||| ||
Sbjct 2389 CGCAGGACTAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCA 2448
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| || ||||| |||| | |||| || | ||| || || || || || || || |||
Sbjct 2449 TCCTCAAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTG 2508
Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579
|| ||| || || | | ||| | ||||| | | ||| ||||| | || |
Sbjct 2509 TCTTGGATCTTGGCCTTCACGTTTTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATG 2568
Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||||||| || || || || ||||| || ||||||
Sbjct 2569 GTTTTACCGGTGAGGGTCTTGACAAAGATTTGCATG 2604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495294415375680
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |