Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq63492 113 7e-20 seq130778 100 4e-16 >seq63492 Length=65416 Score = 113 bits (124), Expect = 7e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 8936 GCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCC 8995 || || || | |||||| || || || | || ||||||||||| || ||||||||| | Sbjct 9097 GCCGTGTTGATGATGTCGAAGCCCACCTGGCCTCCGAAGGTGCTCGGCTTCCAGTACTCG 9156 Query 8996 GGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATG 9055 |||||||||||| |||| ||||||| || || | ||| ||||| ||||||| ||| | Sbjct 9157 GGGGAGCAGATGGCGTTTCCCATGAGGCCCTTGAGGGAGAACGGGGCCCCCATCTCCACC 9216 Query 9056 ATGCTCTCACCGAAGATGGC 9075 ||| |||| ||||| ||||| Sbjct 9217 ATGGTCTCCCCGAATATGGC 9236 >seq130778 Length=4134 Score = 100 bits (110), Expect = 4e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 ||||| | ||||| || || || || || | || || || ||||| |||||||||||| Sbjct 1697 GTTGCAGAATTCACTATATCAAATCCAACTTTGCCTCCAAATGTGCTTGGTTTCCAGTAC 1756 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 || || || ||| |||| ||| || ||||||| |||||| |||||||||| ||| Sbjct 1757 ATGGGAGAACATATGGGGTTCCCCAATAGTCCTTTCAGGGAAAAGGGAGCCCCCATCTCC 1816 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAG 9112 | |||||||| || || | || || ||||| | ||| || | |||| || | || Sbjct 1817 ACCATGCTCTCTCCAAATACTGCTCCTGGACGAGTTTTCTCCAACATGAGACCGGGATAA 1876 Query 9113 AGTTCGACAGCCTCGACGTCGCCAT 9137 | ||| | ||| | | ||| |||| Sbjct 1877 AATTCAAGAGCATTTATGTCACCAT 1901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722316332349600