Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq37454 87.8 2e-12 >seq37454 Length=405 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 8357 AGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAA 8416 || || |||| || |||||||| || || ||||| || || ||||| ||||| | |||| Sbjct 400 AGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAA 341 Query 8417 GCGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCA 8475 |||| || || ||| | || || | | | ||||| ||||||| ||||| ||||| Sbjct 340 GCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCA 282 Query 8476 ACCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 || | || ||||| || | ||| ||||| |||||||||||| Sbjct 281 TCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620911314471360