Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq89243 98.7 1e-15 seq142225 93.3 5e-14 >seq89243 Length=32234 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || |||||| | ||||| ||||||| | |||||||||| || | ||| ||||| |||||| Sbjct 16000 TAAATGTTGCTGGTGTAAGGCTCAATGGACTCATTGTTGCCAAGGATCTGGGCAGTGGAG 16059 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||||||||| || |||| ||| |||||||| Sbjct 16060 GCTGTGGGCATCGGGGCCAGGAGCAGGCTGTT 16091 >seq142225 Length=5922 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| | | |||||| || || |||||| ||| || ||||| || || || |||| Sbjct 3174 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCT 3115 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||| ||||||||| || || || |||||||||||||| ||||||||| ||||| | Sbjct 3114 TCAGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 3055 Query 127659 C 127659 | Sbjct 3054 C 3054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612310523531040