Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq142225 109 1e-18 >seq142225 Length=5922 Score = 109 bits (120), Expect = 1e-18 Identities = 108/137 (79%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| | || ||||| |||||||||||||| ||||| ||| || || || || Sbjct 3039 GGGGAGCGCGTCGTGGCCTTCGCTGCTGTGGAGGGAATCTTCTTCTCTGGATCCTTCGCC 3098 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 ||||| |||||||| ||| | | | || | |||||||| ||| ||| ||||||||||| Sbjct 3099 GCCATTTTCTGGCTGAAG-AAACGAGGCCTGATGCCCGGACTGACCTTCTCCAACGAGCT 3157 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||||| ||||||| Sbjct 3158 CATCAGCAGAGACGAGG 3174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927033041775360