Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq37454 102 1e-16 >seq37454 Length=405 Score = 102 bits (112), Expect = 1e-16 Identities = 123/165 (75%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 27553 AGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAAT 27612 || || |||| ||| |||||||||||||| |||||||| || || || || || ||||| Sbjct 400 AGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAA 341 Query 27613 GCGACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCA 27671 |||| ||| || |||| |||||| | || | || |||||||||| ||||| ||||| Sbjct 340 GCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCA 282 Query 27672 ACCAACATACAAACGGTTGTTAGTTGATGTCACCCACTCACAGAA 27716 |||| || | |||||| | ||| || | ||| | |||||| Sbjct 281 TCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664196319898080